RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 ATPAF1Q5TC12 328 aaPredicted RBP3.8□□□□□ -1.8
VPS8-215ENST00000460158 ACSM6Q6P461 480 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 TMEM65Q6PI78 240 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 LDHAL6AQ6ZMR3 332 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 DCDC5Q6ZRR9 648 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 CHSY1Q86X52 802 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 SUGP1Q8IWZ8 645 aaKnown RBP3.8□□□□□ -1.8
VPS8-215ENST00000460158 OR4N4Q8N0Y3 316 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 GALNT15Q8N3T1 639 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 TTC30BQ8N4P2 665 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 PPHLN1Q8NEY8 458 aaKnown RBP3.8□□□□□ -1.8
VPS8-215ENST00000460158 NPIPB3Q92617 1050 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 HS6ST2Q96MM7 605 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 VPS16Q9H269 839 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 CCDC134Q9H6E4 229 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 KCNK9Q9NPC2 374 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 ABHD10Q9NUJ1 306 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 FBXO28Q9NVF7 368 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 GAR1Q9NY12 217 aaKnown RBP3.8□□□□□ -1.8
VPS8-215ENST00000460158 SRP68Q9UHB9 627 aaKnown RBP3.8□□□□□ -1.8
VPS8-215ENST00000460158 SPATA31A6Q5VVP1 1343 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 HMX3A6NHT5 357 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 PRRT4C9JH25 899 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 H3BNC9 293 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 FIBPO43427 364 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 GCATO75600 419 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 C1RP00736 705 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 CYP2D6P10635 497 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 ELLP55199 621 aaPredicted RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 PROK1P58294 105 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 FAM3BP58499 235 aaPredicted RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 WDR5P61964 334 aaKnown RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 TFF2Q03403 129 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 SF3A3Q12874 501 aaKnown RBP eCLIP3.79□□□□□ -1.8
VPS8-215ENST00000460158 GAB1Q13480 694 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 SIM2Q14190 667 aaPredicted RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 KCNB1Q14721 858 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 LARS2Q15031 903 aaKnown RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 TAF5Q15542 800 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 AAK1Q2M2I8 961 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 CCDC96Q2M329 555 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 PROSER3Q2NL68 480 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 ANKRD40Q6AI12 368 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 FCRLBQ6BAA4 426 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 SUMO4Q6EEV6 95 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 TTLL5Q6EMB2 1281 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 NFRKBQ6P4R8 1299 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 RRAGAQ7L523 313 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 RD3Q7Z3Z2 195 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 OR52L2PQ8NGH6 319 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 ADAMTS18Q8TE60 1221 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 SNRNP27Q8WVK2 155 aaKnown RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 HMGB4Q8WW32 186 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 RUBCNQ92622 972 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 ERP27Q96DN0 273 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 ZNF764Q96H86 408 aaPredicted RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 RITA1Q96K30 269 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 CCDC17Q96LX7 622 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 DDX23Q9BUQ8 820 aaKnown RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 ELOVL1Q9BW60 279 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 BRD8Q9H0E9 1235 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 CDCP1Q9H5V8 836 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 ELAC1Q9H777 363 aaKnown RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 ITM2CQ9NQX7 267 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 LUZP4Q9P127 313 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 SEMA5BQ9P283 1151 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 RAB21Q9UL25 225 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 ZBTB1Q9Y2K1 713 aa3.79□□□□□ -1.8
VPS8-215ENST00000460158 UBE2J1Q9Y385 318 aaPredicted RBP3.79□□□□□ -1.8
VPS8-215ENST00000460158 TTC36A6NLP5 189 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 SLC38A8A6NNN8 435 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 TISP43B9A030 160 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 BTBD19C9JJ37 291 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 POC1B-GALNT4F8VUJ3 575 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 PROP1O75360 226 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 DHRS4L1P0CG22 281 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 RRM1P23921 792 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 CST5P28325 142 aaPredicted RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 DUSP1P28562 367 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 PRKAA2P54646 552 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 RPL15P61313 204 aaKnown RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 MRPS21P82921 87 aaKnown RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 SLC14A1Q13336 389 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 BIRC3Q13489 604 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 CBFBQ13951 182 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 GALNTL6Q49A17 601 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 GLIPR1L2Q4G1C9 344 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 CCDC184Q52MB2 194 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 ZNF569Q5MCW4 686 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 TTC22Q5TAA0 569 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 PRAMEF17Q5VTA0 474 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 KYAT3Q6YP21 454 aaKnown RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 MMS22LQ6ZRQ5 1243 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 RAB11FIP2Q7L804 512 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 ADGRG3Q86Y34 549 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 FTSJ3Q8IY81 847 aaKnown RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 GALNT4Q8N4A0 578 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 PNLDC1Q8NA58 520 aaKnown RBP3.78□□□□□ -1.8
VPS8-215ENST00000460158 GLMPQ8WWB7 406 aa3.78□□□□□ -1.8
VPS8-215ENST00000460158 AKAP1Q92667 903 aaKnown RBP eCLIP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms