RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 KRT4P19013 534 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 LIG3P49916 1009 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 IRF5Q13568 498 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 SEPT6Q14141 434 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 PDK1Q15118 436 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 KBTBD12Q3ZCT8 623 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 TRIM60Q495X7 471 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 XKR4Q5GH76 650 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 MROH9Q5TGP6 573 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 ZNF280DQ6N043 979 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 STRADAQ7RTN6 431 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 XPO6Q96QU8 1125 aaKnown RBP9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 KANSL3Q9P2N6 904 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 PCDHB5Q9Y5E4 795 aa9.65□□□□□ -0.86
NUDCD3-203ENST00000460110 PPP1R12AO14974 1030 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 NUDT17P0C025 328 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 TGM2P21980 687 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 TUBP50607 506 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 SLC45A4Q5BKX6 768 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 ANKRD20A2Q5SQ80 823 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 ANKRD20A1Q5TYW2 823 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 ANKRD20A3Q5VUR7 823 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 BZW1Q7L1Q6 419 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 CROCCP2Q86T23 111 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 TMEM173Q86WV6 379 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 IPMKQ8NFU5 416 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 PPP1R14CQ8TAE6 165 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 TTC17Q96AE7 1141 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 PAFAH2Q99487 392 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 TRPC7Q9HCX4 862 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 GMIPQ9P107 970 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 GOLGA8CPA6NN73 597 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 MAP2K2P36507 400 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 SLC11A1P49279 550 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 PDE1BQ01064 536 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 TAF10Q12962 218 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 NFE2Q16621 373 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 CCSAPQ6IQ19 270 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 IGDCC3Q8IVU1 814 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 UNC5BQ8IZJ1 945 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 DIS3LQ8TF46 1054 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 TTC25Q96NG3 672 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 SERPINB12Q96P63 405 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 NMUR1Q9HB89 426 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 CYP4F11Q9HBI6 524 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 FGFR1OP2Q9NVK5 253 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 TET1Q8NFU7 2136 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 WDR27A2RRH5 827 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 AMHP03971 560 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 RPLP2P05387 115 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 ELF1P32519 619 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 PSMD5Q16401 504 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 GKAP1Q5VSY0 366 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 CIR1Q86X95 450 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 MICAL1Q8TDZ2 1067 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 ZNF473Q8WTR7 871 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 LINC01599Q8WXQ3 324 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 CASP10Q92851 521 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 TMEM169Q96HH4 297 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 SUSD3Q96L08 255 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 FCRL2Q96LA5 508 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 RPRD1AQ96P16 312 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 NPY6RQ99463 290 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 RTP3Q9BQQ7 232 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 EPN3Q9H201 632 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 FZD10Q9ULW2 581 aa9.64□□□□□ -0.87
NUDCD3-203ENST00000460110 MYO1CO00159 1063 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 PRRG1O14668 218 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 BNIP3LO60238 219 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 PAGE1O75459 146 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 ENDOD1O94919 500 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 MGAT1P26572 445 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CCR1P32246 355 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 DPYSL2Q16555 572 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 NCBP2-AS2Q69YL0 99 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 FUT10Q6P4F1 479 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 RHBDF2Q6PJF5 856 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CYP4V2Q6ZWL3 525 aaPredicted RBP9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 MRPL10Q7Z7H8 261 aaKnown RBP9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 LRRC34Q8IZ02 419 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CACNA2D3Q8IZS8 1091 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CFAP52Q8N1V2 620 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 SLC25A41Q8N5S1 370 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 PXYLP1Q8TE99 480 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CYTH2Q99418 400 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 ANLNQ9NQW6 1124 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 RGS18Q9NS28 235 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 SLC17A6Q9P2U8 582 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CCDC195A0A1B0GUA6 201 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 TP73O15350 636 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 APOEP02649 317 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 FYNP06241 537 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 RAG1P15918 1043 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 DNAJC3Q13217 504 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 BTG3Q14201 252 aaPredicted RBP9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CCDC121Q6ZUS5 278 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 TAS1R1Q7RTX1 841 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 CHSY1Q86X52 802 aa9.63□□□□□ -0.87
NUDCD3-203ENST00000460110 MICALL1Q8N3F8 863 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms