RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 SAC3D1A6NKF1 404 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 TTC34A8MYJ7 566 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 HMGB1P1B2RPK0 211 aaPredicted RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 CLIC1O00299 241 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 TSPAN3O60637 253 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 MT-CO3P00414 261 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 SLC3A2P08195 630 aaKnown RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 INSRRP14616 1297 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 CHN1P15882 459 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 RARRES1P49788 294 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 AGTR2P50052 363 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 TAS2R50P59544 299 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 VAMP2P63027 116 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 CYP4F2P78329 520 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 LMOD3Q0VAK6 560 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 MAPRE1Q15691 268 aaKnown RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 TSTD2Q5T7W7 516 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 ATG16L1Q676U5 607 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 KYAT3Q6YP21 454 aaKnown RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 ZNF627Q7L945 461 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 GRASPQ7Z6J2 395 aaPredicted RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 SRFBP1Q8NEF9 429 aaKnown RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 PPHLN1Q8NEY8 458 aaKnown RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 MAFAQ8NHW3 353 aaPredicted RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 SLC2A12Q8TD20 617 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 NEU4Q8WWR8 484 aaPredicted RBP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 TBC1D5Q92609 795 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 AKAP1Q92667 903 aaKnown RBP eCLIP6.12□□□□□ -1.43
CCDC50-203ENST00000460064 MACROD1Q9BQ69 325 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 GPR63Q9BZJ6 419 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 PRDM16Q9HAZ2 1276 aa6.12□□□□□ -1.43
CCDC50-203ENST00000460064 C3orf70A6NLC5 250 aaPredicted RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 KLK10O43240 276 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 ALDOAP04075 364 aaKnown RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 APEHP13798 732 aaKnown RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 DRD4P21917 467 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 SLC8A1P32418 973 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 ELF1P32519 619 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 WDR5P61964 334 aaKnown RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 SIM1P81133 766 aaPredicted RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 MFSD13AQ14CX5 517 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 CNGA3Q16281 694 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 ERCC6LQ2NKX8 1250 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 TMEM63BQ5T3F8 832 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 KIAA1324Q6UXG2 1013 aaKnown RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 RSRC2Q7L4I2 434 aaKnown RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 BCDIN3DQ7Z5W3 292 aaKnown RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 SKA1Q96BD8 255 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 DAZAP1Q96EP5 407 aaKnown RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 CCDC17Q96LX7 622 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 ARHGAP39Q9C0H5 1083 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 B3GNT3Q9Y2A9 372 aa6.11□□□□□ -1.43
CCDC50-203ENST00000460064 HEMK1Q9Y5R4 338 aaPredicted RBP6.11□□□□□ -1.43
CCDC50-203ENST00000460064 CYP3A7-CYP3A51PA0A087WV96 503 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 CCDC196A0A1B0GTZ2 297 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 B8ZZF3 427 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 ANP32CO43423 234 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 MBD4O95243 580 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 KAT7O95251 611 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 HNRNPCP07910 306 aaKnown RBP eCLIP6.1□□□□□ -1.43
CCDC50-203ENST00000460064 CYP3A7P24462 503 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 KRT9P35527 623 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 PNPLA4P41247 253 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 LIFRP42702 1097 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 HOXA4Q00056 320 aaPredicted RBP6.1□□□□□ -1.43
CCDC50-203ENST00000460064 ABHD18Q0P651 414 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 GAB1Q13480 694 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 CBWD5Q5RIA9 395 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 CEP85Q6P2H3 762 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 TMEM65Q6PI78 240 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 LINC01465Q8N7H1 131 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 RRP36Q96EU6 259 aaKnown RBP6.1□□□□□ -1.43
CCDC50-203ENST00000460064 KAZALD1Q96I82 304 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 PPP1R10Q96QC0 940 aaKnown RBP6.1□□□□□ -1.43
CCDC50-203ENST00000460064 HERC2P3Q9BVR0 1158 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 UNC45AQ9H3U1 944 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 TOR3AQ9H497 397 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 IL17RBQ9NRM6 502 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 TMEM98Q9Y2Y6 226 aa6.1□□□□□ -1.43
CCDC50-203ENST00000460064 COPG1Q9Y678 874 aaKnown RBP6.1□□□□□ -1.43
CCDC50-203ENST00000460064 FNDC1Q4ZHG4 1894 aaPredicted RBP6.1□□□□□ -1.43
CCDC50-203ENST00000460064 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
CCDC50-203ENST00000460064 GRM8O00222 908 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 CSF1P09603 554 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 IFIT1P09914 478 aaKnown RBP6.09□□□□□ -1.43
CCDC50-203ENST00000460064 ACP5P13686 325 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 PGM1P36871 562 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 MPP1Q00013 466 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 CDK18Q07002 472 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 GPR162Q16538 588 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 WDR45BQ5MNZ6 344 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 AKNAD1Q5T1N1 836 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 ANO7Q6IWH7 933 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 TMEM88Q6PEY1 159 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 SERPINA13PQ6UXR4 307 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 SLC39A5Q6ZMH5 540 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 TRIM72Q6ZMU5 477 aa6.09□□□□□ -1.43
CCDC50-203ENST00000460064 LAS2Q8IYD9 372 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms