RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 IRX4P78413 519 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 NNTQ13423 1086 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 TRIM61Q5EBN2 209 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 SYPL2Q5VXT5 272 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 NADSYN1Q6IA69 706 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 CHST9Q7L1S5 443 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 BEND5Q7L4P6 421 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 TMEM110Q86TL2 294 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 TAC4Q86UU9 113 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 WFIKKN2Q8TEU8 576 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 AZIN2Q96A70 460 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 IRX2Q9BZI1 471 aaPredicted RBP21.71■■□□□ 1.07
SRM-202ENST00000459997 MKRN2Q9H000 416 aaKnown RBP21.71■■□□□ 1.07
SRM-202ENST00000459997 SIX2Q9NPC8 291 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 EVLQ9UI08 416 aaPredicted RBP21.71■■□□□ 1.07
SRM-202ENST00000459997 GGA2Q9UJY4 613 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 AJAP1Q9UKB5 411 aaPredicted RBP21.71■■□□□ 1.07
SRM-202ENST00000459997 PILRBQ9UKJ0 227 aa21.71■■□□□ 1.07
SRM-202ENST00000459997 EPHX1P07099 455 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 PABPC1P11940 636 aaKnown RBP21.7■■□□□ 1.06
SRM-202ENST00000459997 YWHAZP63104 245 aaKnown RBP21.7■■□□□ 1.06
SRM-202ENST00000459997 ZNF33AQ06730 810 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 VWA3BQ502W6 1294 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 MPP7Q5T2T1 576 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 PASD1Q8IV76 773 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 AHI1Q8N157 1196 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.7■■□□□ 1.06
SRM-202ENST00000459997 DDX50Q9BQ39 737 aaKnown RBP21.7■■□□□ 1.06
SRM-202ENST00000459997 TUBGCP2Q9BSJ2 902 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 NUSAP1Q9BXS6 441 aaKnown RBP21.7■■□□□ 1.06
SRM-202ENST00000459997 NDST4Q9H3R1 872 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 POPDC2Q9HBU9 364 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 TMEM9BQ9NQ34 198 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 STIM2Q9P246 746 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 TJP2Q9UDY2 1190 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 DNAJC12Q9UKB3 198 aa21.7■■□□□ 1.06
SRM-202ENST00000459997 MUC22E2RYF6 1773 aaPredicted RBP21.69■■□□□ 1.06
SRM-202ENST00000459997 NDUFS2O75306 463 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 MOCS2O96007 188 aaPredicted RBP21.69■■□□□ 1.06
SRM-202ENST00000459997 ADRB1P08588 477 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 HOXD12P35452 270 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 PTK2Q05397 1052 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 FNDC3BQ53EP0 1204 aaKnown RBP21.69■■□□□ 1.06
SRM-202ENST00000459997 MIIPQ5JXC2 388 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 PEAR1Q5VY43 1037 aaPredicted RBP21.69■■□□□ 1.06
SRM-202ENST00000459997 KIAA0907Q7Z7F0 614 aaPredicted RBP21.69■■□□□ 1.06
SRM-202ENST00000459997 ADIPOR2Q86V24 386 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 TMPRSS6Q8IU80 811 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 HJURPQ8NCD3 748 aaPredicted RBP21.69■■□□□ 1.06
SRM-202ENST00000459997 WFDC5Q8TCV5 224 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 CYB5D2Q8WUJ1 264 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 SLC39A13Q96H72 371 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 HSPA12BQ96MM6 686 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 PRICKLE1Q96MT3 831 aaPredicted RBP21.69■■□□□ 1.06
SRM-202ENST00000459997 LSM14BQ9BX40 385 aaKnown RBP21.69■■□□□ 1.06
SRM-202ENST00000459997 PLA2G4CQ9UP65 541 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 SPTBN2O15020 2390 aa21.69■■□□□ 1.06
SRM-202ENST00000459997 CKAP5Q14008 2032 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 TYW5A2RUC4 315 aaKnown RBP21.68■■□□□ 1.06
SRM-202ENST00000459997 CFIP05156 583 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 PNMA6AP0CW24 399 aaPredicted RBP21.68■■□□□ 1.06
SRM-202ENST00000459997 HLA-EP13747 358 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 CD70P32970 193 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 LMAN2Q12907 356 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 DAB2IPQ5VWQ8 1189 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 MBLAC2Q68D91 279 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 METTL3Q86U44 580 aaKnown RBP21.68■■□□□ 1.06
SRM-202ENST00000459997 CACUL1Q86Y37 369 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 SLC41A1Q8IVJ1 513 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 MFN1Q8IWA4 741 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 WDTC1Q8N5D0 677 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 PRCCQ92733 491 aaPredicted RBP21.68■■□□□ 1.06
SRM-202ENST00000459997 SIPA1Q96FS4 1042 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 PPP1R13BQ96KQ4 1090 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 CPXM1Q96SM3 734 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 NUCKS1Q9H1E3 243 aaKnown RBP21.68■■□□□ 1.06
SRM-202ENST00000459997 USP36Q9P275 1121 aaKnown RBP21.68■■□□□ 1.06
SRM-202ENST00000459997 PCDHGC3Q9UN70 934 aa21.68■■□□□ 1.06
SRM-202ENST00000459997 KCNJ18B7U540 433 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 FOXN3O00409 490 aaPredicted RBP21.67■■□□□ 1.06
SRM-202ENST00000459997 PES1O00541 588 aaKnown RBP21.67■■□□□ 1.06
SRM-202ENST00000459997 CDX4O14627 284 aaPredicted RBP21.67■■□□□ 1.06
SRM-202ENST00000459997 TRUB2O95900 331 aaKnown RBP21.67■■□□□ 1.06
SRM-202ENST00000459997 APOEP02649 317 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 CD6P30203 668 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 COPAP53621 1224 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 RPS24P62847 133 aaKnown RBP21.67■■□□□ 1.06
SRM-202ENST00000459997 KCNJ12Q14500 433 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 TAF5Q15542 800 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 ZC3H12AQ5D1E8 599 aaKnown RBP21.67■■□□□ 1.06
SRM-202ENST00000459997 SMYD5Q6GMV2 418 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 SLC23A3Q6PIS1 610 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 ZNF557Q8N988 423 aaPredicted RBP21.67■■□□□ 1.06
SRM-202ENST00000459997 CEP76Q8TAP6 659 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 MYEOVQ96EZ4 313 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 NOX5Q96PH1 765 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 LHX5Q9H2C1 402 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 ITM2CQ9NQX7 267 aa21.67■■□□□ 1.06
SRM-202ENST00000459997 ATP5BP06576 529 aaKnown RBP21.66■■□□□ 1.06
SRM-202ENST00000459997 DLDP09622 509 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms