RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	DTWD2	Q8NBA8	298 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	CENPI	Q92674	756 aa	Predicted RBP	10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	ARHGEF26	Q96DR7	871 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	MCEE	Q96PE7	176 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	NELL2	Q99435	816 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	PACSIN1	Q9BY11	444 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	CHRD	Q9H2X0	955 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	ZDHHC4	Q9NPG8	344 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	ARHGEF38	Q9NXL2	777 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	WDR35	Q9P2L0	1181 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	ZNF510	Q9Y2H8	683 aa		10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	BZW2	Q9Y6E2	419 aa	Known RBP	10.65	□□□□□ -0.7
MRPL55-223	ENST00000459783	KIAA1549L	Q6ZVL6	1849 aa		10.65	□□□□□ -0.71
MRPL55-223	ENST00000459783	MYOF	Q9NZM1	2061 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783		A0A0A0MRY4	1105 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	PRRT4	C9JH25	899 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	CCP110	O43303	1012 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	PAGE1	O75459	146 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	KAT7	O95251	611 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	PDGFRA	P16234	1089 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	TACR2	P21452	398 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	CHKA	P35790	457 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	EIF2D	P41214	584 aa	Known RBP	10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	HDAC4	P56524	1084 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	MTAP	Q13126	283 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	TMEM215	Q68D42	235 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	FAM131B	Q86XD5	332 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	UNC45B	Q8IWX7	931 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	CFAP52	Q8N1V2	620 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	IGSF8	Q969P0	613 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	ZNF653	Q96CK0	615 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	VCPIP1	Q96JH7	1222 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	LMLN	Q96KR4	655 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	BTN2A3P	Q96KV6	586 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	PNKP	Q96T60	521 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	SELENOO	Q9BVL4	669 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	THAP2	Q9H0W7	228 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	SPTLC3	Q9NUV7	552 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	DNAJC17	Q9NVM6	304 aa	Known RBP	10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	RRN3	Q9NYV6	651 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	STAP1	Q9ULZ2	295 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	MRPS17	Q9Y2R5	130 aa	Known RBP	10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	HS3ST4	Q9Y661	456 aa		10.64	□□□□□ -0.71
MRPL55-223	ENST00000459783	SSU72P8	A0A1W2PR75	194 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	TMEM191C	A6NGB0	347 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	RNF40	O75150	1001 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	APOE	P02649	317 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	TDGF1	P13385	188 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	ABCB4	P21439	1286 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	GPD1	P21695	349 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	FECH	P22830	423 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	HLA-F	P30511	346 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	SDC4	P31431	198 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	CCR1	P32246	355 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	RDX	P35241	583 aa	Known RBP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	KIR2DL1	P43626	348 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	SLC11A2	P49281	568 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	ZNF143	P52747	638 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	DEUP1	Q05D60	604 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	TCF15	Q12870	199 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	CDO1	Q16878	200 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	GEN1	Q17RS7	908 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	FBXL22	Q6P050	247 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	ALKBH5	Q6P6C2	394 aa	Known RBP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	C1orf228	Q6PIY5	440 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	CHSY1	Q86X52	802 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	CIR1	Q86X95	450 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	CPNE8	Q86YQ8	564 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	LGI2	Q8N0V4	545 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	CCDC185	Q8N715	623 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	TERB1	Q8NA31	727 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	OR52K2	Q8NGK3	314 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	USP33	Q8TEY7	942 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	DDI1	Q8WTU0	396 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	FAM172A	Q8WUF8	416 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	TMA16	Q96EY4	203 aa	Known RBP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	TKTL2	Q9H0I9	626 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	ARHGEF4	Q9NR80	690 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	CNOT8	Q9UFF9	292 aa	Known RBP	10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	NEU3	Q9UQ49	428 aa		10.63	□□□□□ -0.71
MRPL55-223	ENST00000459783	FAM72C	H0Y354	149 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	GALR2	O43603	387 aa	Predicted RBP	10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	TBL1X	O60907	577 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	CYP1A2	P05177	515 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	TCF4	P15884	667 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	DRD1	P21728	446 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	GBP1	P32455	592 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	CD70	P32970	193 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	GRIA2	P42262	883 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	DGKG	P49619	791 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	GALC	P54803	685 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	SEC13	P55735	322 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	AMPD2	Q01433	879 aa		10.62	□□□□□ -0.71
MRPL55-223	ENST00000459783	SATB1	Q01826	763 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms