RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 NIPA2Q8N8Q9 360 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 ST13P5Q8NFI4 369 aaPredicted RBP10.71□□□□□ -0.69
USP39-210ENST00000459775 FNIP1Q8TF40 1166 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 NT5C3BQ969T7 300 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 TCEAL4Q96EI5 215 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 SAMD11Q96NU1 681 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 HEMGNQ9BXL5 484 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 RNF38Q9H0F5 515 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 FBXO44Q9H4M3 255 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 FAM204AQ9H8W3 233 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 IL21Q9HBE4 155 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 ASNSD1Q9NWL6 643 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 DMGDHQ9UI17 866 aaKnown RBP10.71□□□□□ -0.69
USP39-210ENST00000459775 USP18Q9UMW8 372 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 NR2E1Q9Y466 385 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 PCDHA3Q9Y5H8 950 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 COL4A4P53420 1690 aaPredicted RBP10.71□□□□□ -0.7
USP39-210ENST00000459775 ZNF840PA6NDX5 716 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 KIF2AO00139 706 aaPredicted RBP10.7□□□□□ -0.7
USP39-210ENST00000459775 DPYSL4O14531 572 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 CEP104O60308 925 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 E2F6O75461 281 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 RNF8O76064 485 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 RTN3O95197 1032 aaPredicted RBP10.7□□□□□ -0.7
USP39-210ENST00000459775 LRG1P02750 347 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 HNRNPCP07910 306 aaKnown RBP eCLIP10.7□□□□□ -0.7
USP39-210ENST00000459775 KRT10P13645 584 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 PTPN9P43378 593 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 MRPS25P82663 173 aaKnown RBP10.7□□□□□ -0.7
USP39-210ENST00000459775 CYP4F8P98187 520 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 DEUP1Q05D60 604 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 MMRN1Q13201 1228 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 KRT72Q14CN4 511 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 PPM1LQ5SGD2 360 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 C10orf120Q5SQS8 335 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 TXNDC8Q6A555 127 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 TMC5Q6UXY8 1006 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 GAREM2Q75VX8 874 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 ZNF771Q7L3S4 317 aaPredicted RBP10.7□□□□□ -0.7
USP39-210ENST00000459775 CREG2Q8IUH2 290 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 ZDHHC14Q8IZN3 488 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 HDAC7Q8WUI4 952 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 IRGQQ8WZA9 623 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 CENPIQ92674 756 aaPredicted RBP10.7□□□□□ -0.7
USP39-210ENST00000459775 PSMG2Q969U7 264 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 NACC2Q96BF6 587 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 TTLL2Q9BWV7 592 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 C11orf16Q9NQ32 467 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 GKN1Q9NS71 199 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.7□□□□□ -0.7
USP39-210ENST00000459775 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.7□□□□□ -0.7
USP39-210ENST00000459775 C6orf203Q9P0P8 240 aaPredicted RBP10.7□□□□□ -0.7
USP39-210ENST00000459775 STK39Q9UEW8 545 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 A0A1W2PRU2 124 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 TLR5O60602 858 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 GLI1P08151 1106 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 CSH1P0DML2 217 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 CSH2P0DML3 217 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 MYL4P12829 197 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 SCNN1AP37088 669 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 SLC1A1P43005 524 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 NSUN2Q08J23 767 aaKnown RBP eCLIP10.7□□□□□ -0.7
USP39-210ENST00000459775 VEPH1Q14D04 833 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 TCEAL5Q5H9L2 206 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 POTEHQ6S545 545 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 MFSD7Q6UXD7 560 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 NETO2Q8NC67 525 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 WBP2Q969T9 261 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 SLITRK1Q96PX8 696 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 FAM118BQ9BPY3 351 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 LRRC3Q9BY71 257 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 TRPC7Q9HCX4 862 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 WDR6Q9NNW5 1121 aaKnown RBP10.7□□□□□ -0.7
USP39-210ENST00000459775 ABCC13Q9NSE7 274 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 SMPD4Q9NXE4 827 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 RSPH14Q9UHP6 348 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 MRFAP1Q9Y605 127 aa10.7□□□□□ -0.7
USP39-210ENST00000459775 CCDC195A0A1B0GUA6 201 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 FAM72CH0Y354 149 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 SART1O43290 800 aaKnown RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 PRPSAP2O60256 369 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 MOCS2O96007 188 aaPredicted RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 ZDHHC11BP0C7U3 371 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 GABRR2P28476 465 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 SLC5A9Q2M3M2 681 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 LEXMQ3ZCV2 418 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 FAM72AQ5TYM5 149 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 FAM72DQ6L9T8 149 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 BNIPLQ7Z465 357 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 FAM72BQ86X60 149 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 MYLK4Q86YV6 388 aaPredicted RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 TMC8Q8IU68 726 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 RHOT1Q8IXI2 618 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 SCML4Q8N228 414 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 RNF139Q8WU17 664 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 MRPL38Q96DV4 380 aaKnown RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 DHRS1Q96LJ7 313 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 MYRFLQ96LU7 910 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 SNRNP25Q9BV90 132 aaKnown RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 AP1M1Q9BXS5 423 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms