RNA–Protein interactions for RNA: ENST00000458397.1

GAPDHP53-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 53, humanhuman

BASIC

Gene GAPDHP53, Length 924 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP53-201ENST00000458397 NEU3Q9UQ49 428 aa7.35□□□□□ -1.23
GAPDHP53-201ENST00000458397 MRPS17Q9Y2R5 130 aaKnown RBP7.35□□□□□ -1.23
GAPDHP53-201ENST00000458397 CACNA1AO00555 2505 aa7.35□□□□□ -1.23
GAPDHP53-201ENST00000458397 SSU72P8A0A1W2PR75 194 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 TMEM191CA6NGB0 347 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 TMCO5BA8MYB1 307 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 NEDD8-MDP1E9PL57 170 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 M0QYT0 321 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 GALR2O43603 387 aaPredicted RBP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 RTN2O75298 545 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 KAT7O95251 611 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 PAPSS2O95340 614 aaPredicted RBP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 KRT3P12035 628 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 PDGFRAP16234 1089 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 DRD1P21728 446 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 HOXC13P31276 330 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 CCR1P32246 355 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 EIF4A3P38919 411 aaKnown RBP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 MAGEA9P43362 315 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 KIR2DL1P43626 348 aaPredicted RBP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 SLC11A2P49281 568 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 SULT1E1P49888 294 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 IRAK1P51617 712 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 ZNF143P52747 638 aaPredicted RBP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 NUBP1P53384 320 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 TCF15Q12870 199 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 MTAPQ13126 283 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 NR1H3Q13133 447 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 SLC18A3Q16572 532 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 C15orf59Q2T9L4 293 aaPredicted RBP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 C5orf22Q49AR2 442 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 TDRD12Q587J7 1177 aaKnown RBP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 MS4A13Q5J8X5 152 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 DGKKQ5KSL6 1271 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 BRMS1LQ5PSV4 323 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 MPP7Q5T2T1 576 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 PPP1R2P3Q6NXS1 205 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 DNAJC24Q6P3W2 148 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 CYP4V2Q6ZWL3 525 aaPredicted RBP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 STRADAQ7RTN6 431 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 KIAA0907Q7Z7F0 614 aaPredicted RBP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 CNGA4Q8IV77 575 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 SYNPOQ8N3V7 929 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 ARFGAP1Q8N6T3 406 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 TERB1Q8NA31 727 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 WFDC5Q8TCV5 224 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 ARHGEF26Q96DR7 871 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 BTN2A3PQ96KV6 586 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 MCEEQ96PE7 176 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 PNKPQ96T60 521 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 IER2Q9BTL4 223 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 LMAN1LQ9HAT1 526 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 CD248Q9HCU0 757 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 TMPRSS4Q9NRS4 437 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 PLK2Q9NYY3 685 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 ZNF212Q9UDV6 495 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 STAP1Q9ULZ2 295 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 SLC27A6Q9Y2P4 619 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 HS3ST4Q9Y661 456 aa7.34□□□□□ -1.23
GAPDHP53-201ENST00000458397 MIA3Q5JRA6 1907 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 DNAH14Q0VDD8 3507 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 IGLV3-10A0A075B6K4 115 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 SYNJ2BP-COX16A0A087WUM0 186 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 CHURC1-FNTBB4DL54 471 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 PRRT4C9JH25 899 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 AKR1B15C9JRZ8 316 aaPredicted RBP7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 K7ESF4 209 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 CCP110O43303 1012 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 TSPAN3O60637 253 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 RNF40O75150 1001 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 PAGE1O75459 146 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 MOCS2O96007 188 aaPredicted RBP7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 F9P00740 461 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 APOEP02649 317 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 CYP1A2P05177 515 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 MYBL1P10243 752 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 SLC2A3P11169 496 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 TACR2P21452 398 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 GPD1P21695 349 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 CDC25BP30305 580 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 HLA-FP30511 346 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 GBP1P32455 592 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 RDXP35241 583 aaKnown RBP7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 GGCXP38435 758 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 GRIA2P42262 883 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 RPS24P62847 133 aaKnown RBP7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 ATP11AP98196 1134 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 AMPD2Q01433 879 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 DEUP1Q05D60 604 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 KDSRQ06136 332 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 GFPT1Q06210 699 aaPredicted RBP7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 SCAPQ12770 1279 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 GRSF1Q12849 480 aaKnown RBP eCLIP7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 NME3Q13232 169 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 AUHQ13825 339 aaKnown RBP7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 LRRC32Q14392 662 aa7.33□□□□□ -1.24
GAPDHP53-201ENST00000458397 GEN1Q17RS7 908 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms