RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PCDHGA4Q9Y5G9 962 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 TK2O00142 265 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 LBPP18428 481 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 TPGS1Q6ZTW0 290 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 RNF44Q7L0R7 432 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 GLT6D1Q7Z4J2 308 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 RNFT2Q96EX2 444 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 HIC2Q96JB3 615 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 NMRK1Q9NWW6 199 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 BUD23O43709 281 aaKnown RBP20.11■□□□□ 0.81
SNX27-204ENST00000458013 SLC2A3P11169 496 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 KPNB1Q14974 876 aaKnown RBP20.11■□□□□ 0.81
SNX27-204ENST00000458013 SLC26A11Q86WA9 606 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 SLC41A1Q8IVJ1 513 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 CACTIN-AS1Q8N1I8 211 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 GLT1D1Q96MS3 346 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 IL1RAPL1Q9NZN1 696 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 ACOT9Q9Y305 439 aa20.11■□□□□ 0.81
SNX27-204ENST00000458013 CNOT3O75175 753 aaKnown RBP20.1■□□□□ 0.81
SNX27-204ENST00000458013 USP17L7P0C7H9 530 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 OR1E1P30953 314 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 CAP2P40123 477 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 RGS18Q9NS28 235 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 DYTNA2CJ06 578 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 SNRPFP62306 86 aaKnown RBP20.1■□□□□ 0.81
SNX27-204ENST00000458013 CNGA2Q16280 664 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 IZUMO1Q8IYV9 350 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 NETO2Q8NC67 525 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 SNCAIPQ9Y6H5 919 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 CEP152O94986 1710 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 A0A0U1RQJ8 604 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 TSPAN8P19075 237 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 ADSLP30566 484 aaPredicted RBP20.1■□□□□ 0.81
SNX27-204ENST00000458013 TUBP50607 506 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 TLK2Q86UE8 772 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 TBL1YQ9BQ87 522 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 SEMA4BQ9NPR2 832 aaPredicted RBP20.1■□□□□ 0.81
SNX27-204ENST00000458013 GPR75-ASB3A0A0A6YYF3 556 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 TRDMT1O14717 391 aaKnown RBP20.1■□□□□ 0.81
SNX27-204ENST00000458013 GTF2E2P29084 291 aaKnown RBP20.1■□□□□ 0.81
SNX27-204ENST00000458013 ACAP1Q15027 740 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 PYDC1Q8WXC3 89 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 SPON1Q9HCB6 807 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 VPS9D1Q9Y2B5 631 aa20.1■□□□□ 0.81
SNX27-204ENST00000458013 PQBP1O60828 265 aaKnown RBP20.09■□□□□ 0.81
SNX27-204ENST00000458013 PIAS1O75925 651 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 VCLP18206 1134 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 GRK4P32298 578 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 EPHB3P54753 998 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 GSTA3Q16772 222 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 PDZK1Q5T2W1 519 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 ADGRE3Q9BY15 652 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 BPIFA1Q9NP55 256 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 LNPEPQ9UIQ6 1025 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 SHOC2Q9UQ13 582 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 CCR4P51679 360 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 TMEM132BQ14DG7 1078 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 EARS2Q5JPH6 523 aaKnown RBP20.09■□□□□ 0.81
SNX27-204ENST00000458013 ZBTB45Q96K62 511 aaPredicted RBP20.09■□□□□ 0.81
SNX27-204ENST00000458013 STN1Q9H668 368 aaKnown RBP20.09■□□□□ 0.81
SNX27-204ENST00000458013 PRKAG3Q9UGI9 489 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 CES2O00748 559 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 ZNF37AP17032 561 aaPredicted RBP20.09■□□□□ 0.81
SNX27-204ENST00000458013 PLEKHH3Q7Z736 793 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 TRPM5Q9NZQ8 1165 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 RNASEH1O60930 286 aaKnown RBP20.09■□□□□ 0.81
SNX27-204ENST00000458013 BST2Q10589 180 aaKnown RBP20.09■□□□□ 0.81
SNX27-204ENST00000458013 NEK10Q6ZWH5 1172 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 SPATA6LQ8N4H0 392 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 MTIF3Q9H2K0 278 aaKnown RBP20.09■□□□□ 0.81
SNX27-204ENST00000458013 ZNF624Q9P2J8 865 aaPredicted RBP20.09■□□□□ 0.81
SNX27-204ENST00000458013 BTN3A1O00481 513 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 URODP06132 367 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 CCR1P32246 355 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 CCNIQ14094 377 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 TTI2Q6NXR4 508 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 COG5Q9UP83 839 aa20.09■□□□□ 0.81
SNX27-204ENST00000458013 DDTLA6NHG4 134 aaPredicted RBP20.08■□□□□ 0.81
SNX27-204ENST00000458013 CHURC1-FNTBB4DL54 471 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 PROSCO94903 275 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 MPOP05164 745 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 ZNF618Q5T7W0 954 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 CLVS1Q8IUQ0 354 aaPredicted RBP20.08■□□□□ 0.81
SNX27-204ENST00000458013 ANKRD13AQ8IZ07 590 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 LGI2Q8N0V4 545 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 OXNAD1Q96HP4 312 aaPredicted RBP20.08■□□□□ 0.81
SNX27-204ENST00000458013 RXFP1Q9HBX9 757 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 DMGDHQ9UI17 866 aaKnown RBP20.08■□□□□ 0.81
SNX27-204ENST00000458013 PTPN4P29074 926 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 RFX5P48382 616 aaPredicted RBP20.08■□□□□ 0.81
SNX27-204ENST00000458013 NPY2RP49146 381 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 ST13P50502 369 aaKnown RBP20.08■□□□□ 0.81
SNX27-204ENST00000458013 FAAP100Q0VG06 881 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 CCDC126Q96EE4 140 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 PAIP1Q9H074 479 aaKnown RBP20.08■□□□□ 0.81
SNX27-204ENST00000458013 TCF7L2Q9NQB0 619 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 VPS45Q9NRW7 570 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 VAPBO95292 243 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 RARGP13631 454 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 RPA3P35244 121 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms