RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CHKBQ9Y259 395 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 RAD54BQ9Y620 910 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 MAD1L1Q9Y6D9 718 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 MYO18AQ92614 2054 aaKnown RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 PPP1R12AO14974 1030 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-202ENST00000457422 CREB3O43889 395 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 KRT38O76015 456 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 IL1BP01584 269 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 ADRA1BP35368 520 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 CACNA2D1P54289 1103 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 LRRC8BQ6P9F7 803 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 AGMOQ6ZNB7 445 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 COLGALT1Q8NBJ5 622 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 SLC7A14Q8TBB6 771 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 ARHGEF3Q9NR81 526 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 TMEM30AQ9NV96 361 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 RRN3Q9NYV6 651 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 MOCS1Q9NZB8 636 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 YJEFN3A6XGL0 299 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 HHLA1C9JL84 531 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 E7ENQ6 273 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 RNF103O00237 685 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 EEF2KO00418 725 aaKnown RBP17.19■□□□□ 0.34
CCDC43-202ENST00000457422 C2CD2LO14523 706 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 COPEO14579 308 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 CAPN9O14815 690 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 GPR182O15218 404 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 UNC5CO95185 931 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 SLC10A3P09131 477 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 CSH1P0DML2 217 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 CSH2P0DML3 217 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 HCAR3P49019 387 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 SNCBQ16143 134 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 TBC1D1Q86TI0 1168 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-202ENST00000457422 ADAM32Q8TC27 787 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 FAM111AQ96PZ2 611 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 LRRC37BQ96QE4 947 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 KCNK16Q96T55 309 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 PAAF1Q9BRP4 392 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 MYLK2Q9H1R3 596 aa17.19■□□□□ 0.34
CCDC43-202ENST00000457422 AGO3Q9H9G7 860 aaKnown RBP17.19■□□□□ 0.34
CCDC43-202ENST00000457422 DNAH12Q6ZR08 3092 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 UGT1A9O60656 530 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 RFPL1O75677 317 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 ATP5HO75947 161 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 ALDH1A2O94788 518 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 TROVE2P10155 538 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCDC43-202ENST00000457422 PCSK1P29120 753 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 SERPINB9P50453 376 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 AP1B1Q10567 949 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 WASHC5Q12768 1159 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 RIPK1Q13546 671 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 UPP1Q16831 310 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 PARP6Q2NL67 630 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 TRMT10BQ6PF06 316 aaKnown RBP17.18■□□□□ 0.34
CCDC43-202ENST00000457422 CTU1Q7Z7A3 348 aaKnown RBP17.18■□□□□ 0.34
CCDC43-202ENST00000457422 SAPCD2Q86UD0 394 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 CCNJLQ8IV13 435 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 MAGEC3Q8TD91 643 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 TRIB2Q92519 343 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 PTPRN2Q92932 1015 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 KLHL29Q96CT2 875 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 SMARCD1Q96GM5 515 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 OXNAD1Q96HP4 312 aaPredicted RBP17.18■□□□□ 0.34
CCDC43-202ENST00000457422 SRPK1Q96SB4 655 aaKnown RBP17.18■□□□□ 0.34
CCDC43-202ENST00000457422 PRDM12Q9H4Q4 367 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 UGT1A7Q9HAW7 530 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 UGT1A10Q9HAW8 530 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 UGT1A8Q9HAW9 530 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 CSNK1G1Q9HCP0 422 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 TXLNGQ9NUQ3 528 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 IGSF9Q9P2J2 1179 aa17.18■□□□□ 0.34
CCDC43-202ENST00000457422 KLF11O14901 512 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 ZNF623O75123 536 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 LTFP02788 710 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 KCNJ2P63252 427 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 BHLHA9Q7RTU4 235 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 ERP27Q96DN0 273 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 STAMBPL1Q96FJ0 436 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 CEP41Q9BYV8 373 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 ARHGAP39Q9C0H5 1083 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 SPC25Q9HBM1 224 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 ALG13Q9NP73 1137 aaKnown RBP17.17■□□□□ 0.34
CCDC43-202ENST00000457422 ANLNQ9NQW6 1124 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 FBXW11Q9UKB1 542 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 TDRD15B5MCY1 1934 aaKnown RBP17.17■□□□□ 0.34
CCDC43-202ENST00000457422 CHUKO15111 745 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 TGDSO95455 350 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 USP17L7P0C7H9 530 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 IBSPP21815 317 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-202ENST00000457422 CNTFP26441 200 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 SERPINB4P48594 390 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 RAB27AP51159 221 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 ZNF135P52742 658 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-202ENST00000457422 TIGD5Q53EQ6 642 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 MFSD14CQ5VZR4 134 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 TIFABQ6ZNK6 161 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 CDHR3Q6ZTQ4 885 aa17.17■□□□□ 0.34
CCDC43-202ENST00000457422 PDZD4Q76G19 769 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-202ENST00000457422 TTC17Q96AE7 1141 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms