RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ZNF585AQ6P3V2 769 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 C6orf89Q6UWU4 347 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 ARHGAP36Q6ZRI8 547 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 CD302Q8IX05 232 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 KLHL36Q8N4N3 616 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 B4GALNT2Q8NHY0 566 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 SLC35G2Q8TBE7 412 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 SLC22A8Q8TCC7 542 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 PHOSPHO1Q8TCT1 267 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 SLC26A7Q8TE54 656 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 TRAPPC12Q8WVT3 735 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 LPIN2Q92539 896 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 FAM149B1Q96BN6 582 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 C11orf24Q96F05 449 aaPredicted RBP5.67□□□□□ -1.5
VPS41-209ENST00000457055 SNF8Q96H20 258 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 C1orf159Q96HA4 380 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 NLRP4Q96MN2 994 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 NUP88Q99567 741 aaPredicted RBP5.67□□□□□ -1.5
VPS41-209ENST00000457055 MENTQ9BUN1 341 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 TRIM4Q9C037 500 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 KRT23Q9C075 422 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 SCAND2PQ9GZW5 306 aaPredicted RBP5.67□□□□□ -1.5
VPS41-209ENST00000457055 SMOC1Q9H4F8 434 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 BARX1Q9HBU1 254 aaPredicted RBP5.67□□□□□ -1.5
VPS41-209ENST00000457055 RPRD1BQ9NQG5 326 aaKnown RBP5.67□□□□□ -1.5
VPS41-209ENST00000457055 TAS2R3Q9NYW6 316 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 EHD2Q9NZN4 543 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 HMG20BQ9P0W2 317 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 UBA2Q9UBT2 640 aaPredicted RBP5.67□□□□□ -1.5
VPS41-209ENST00000457055 IL19Q9UHD0 177 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 DDX25Q9UHL0 483 aaKnown RBP5.67□□□□□ -1.5
VPS41-209ENST00000457055 RCOR1Q9UKL0 485 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 PSME2Q9UL46 239 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 PAIP2BQ9ULR5 123 aaKnown RBP5.67□□□□□ -1.5
VPS41-209ENST00000457055 ARHGAP26Q9UNA1 814 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 WASF3Q9UPY6 502 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 NALCNQ8IZF0 1738 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 SLIT2O94813 1529 aa5.67□□□□□ -1.5
VPS41-209ENST00000457055 ADAMTS13Q76LX8 1427 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ADGRL3Q9HAR2 1447 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 GCC2Q8IWJ2 1684 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 MYOM2P54296 1465 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 GOLGA6L7A0A1B0GV03 622 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 TMEM221A6NGB7 291 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 A6NNZ2 444 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 KRIT1O00522 736 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 IRAK2O43187 625 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 SUV39H1O43463 412 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 AP1G1O43747 822 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 STRNO43815 780 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ADCY3O60266 1144 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 NIPSNAP2O75323 286 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 KLHL18O94889 574 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 KRT14P02533 472 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 PRKAR1AP10644 381 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ALOX15P16050 662 aaPredicted RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 IL11P20809 199 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 KCNA5P22460 613 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 HOXD13P35453 343 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 CETN2P41208 172 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 GDF5P43026 501 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 NEK4P51957 841 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ARHGDIBP52566 201 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 RARSP54136 660 aaKnown RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 SLC12A3P55017 1021 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ACTR1AP61163 376 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 IFI35P80217 286 aaPredicted RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 MRPS5P82675 430 aaKnown RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 TFAP4Q01664 338 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ACTN3Q08043 901 aaPredicted RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 NFATC3Q12968 1075 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 CUL1Q13616 776 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 BYSLQ13895 437 aaKnown RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 COTL1Q14019 142 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 SQLEQ14534 574 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 TAF5Q15542 800 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 CRY1Q16526 586 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 LRRC23Q53EV4 343 aaPredicted RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 XKR3Q5GH77 459 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 NDUFAF5Q5TEU4 345 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 FAM173BQ6P4H8 233 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 LMBR1LQ6UX01 489 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 MEX3BQ6ZN04 569 aaKnown RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 SESTD1Q86VW0 696 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 WDR49Q8IV35 697 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 C12orf56Q8IXR9 622 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ARL14Q8N4G2 192 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 C10orf53Q8N6V4 93 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 DNAJC5GQ8N7S2 189 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ZBTB38Q8NAP3 1195 aaPredicted RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 FAM156AQ8NDB6 213 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 C7orf57Q8NEG2 295 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 DNERQ8NFT8 737 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 CAGE1Q8TC20 777 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 KIAA1191Q96A73 305 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 C19orf60Q96EN9 201 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 SGF29Q96ES7 293 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 AK8Q96MA6 479 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 DACH2Q96NX9 599 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms