RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CLEC20AQ6ZU45 233 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 COLGALT1Q8NBJ5 622 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 IQCGQ9H095 443 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 EIF2B3Q9NR50 452 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 LNPEPQ9UIQ6 1025 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 MTO1Q9Y2Z2 717 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 SF3B1O75533 1304 aaKnown RBP eCLIP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 C17orf102A2RUQ5 167 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 IGFBP6P24592 240 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 SYPL2Q5VXT5 272 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 LRRC8BQ6P9F7 803 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 ZNF449Q6P9G9 518 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 PAXIP1Q6ZW49 1069 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 TLE6Q9H808 572 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 HEY2Q9UBP5 337 aa18.94■□□□□ 0.62
SEMA3B-209ENST00000456560 DOCK3Q8IZD9 2030 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 A0A0G2JND7 137 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 RASSF2P50749 326 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 BEX3Q00994 111 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 DPYSQ14117 519 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 PAFAH1B3Q15102 231 aaKnown RBP18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 RASAL3Q86YV0 1011 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 P2RY11Q96G91 374 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 TBC1D10AQ9BXI6 508 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 TMEM120AQ9BXJ8 343 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 ABT1Q9ULW3 272 aaKnown RBP18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 TSC2P49815 1807 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 WDR27A2RRH5 827 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 RNF103O00237 685 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 HNRNPCL1O60812 293 aaKnown RBP18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 OPHN1O60890 802 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 NEFHP12036 1026 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 CDC25CP30307 473 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 CRHR1P34998 444 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 HFE2Q6ZVN8 426 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 TRIM42Q8IWZ5 723 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 WNT8BQ93098 351 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 SKA1Q96BD8 255 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 LRRC4Q9HBW1 653 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 SIRPGQ9P1W8 387 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 STAP1Q9ULZ2 295 aa18.93■□□□□ 0.62
SEMA3B-209ENST00000456560 SDR42E2A6NKP2 422 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 M0QYT0 321 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 FYNP06241 537 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 PTPN4P29074 926 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 WASHC5Q12768 1159 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 CCL14Q16627 93 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 MDH1BQ5I0G3 518 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 LONP2Q86WA8 852 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 PDCD7Q8N8D1 485 aaKnown RBP18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 SMC1BQ8NDV3 1235 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 ARMC2Q8NEN0 867 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 KCNV2Q8TDN2 545 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 ZFP42Q96MM3 310 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 SLC13A1Q9BZW2 595 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 SLC24A3Q9HC58 644 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 CRTAC1Q9NQ79 661 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 PIGVQ9NUD9 493 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 Q9Y3F1 56 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 STK10O94804 968 aaKnown RBP18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 CNTFP26441 200 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 TKTL1P51854 596 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 NIPAL4Q0D2K0 466 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 PDK1Q15118 436 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 MROH9Q5TGP6 573 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 CES4AQ5XG92 561 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 TWF2Q6IBS0 349 aaKnown RBP18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 MARK2Q7KZI7 788 aaKnown RBP18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 NETO2Q8NC67 525 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 RNF169Q8NCN4 708 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 DEPDC1BQ8WUY9 529 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 ARNTL2Q8WYA1 636 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 C7orf26Q96N11 449 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 AP5M1Q9H0R1 490 aa18.92■□□□□ 0.62
SEMA3B-209ENST00000456560 ZNF638Q14966 1978 aaKnown RBP18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 CCDC189A1A4V9 331 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 F5H423 210 aaPredicted RBP18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 NRP1O14786 923 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 DCLK1O15075 740 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 DEUP1Q05D60 604 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 AP1B1Q10567 949 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 RGMBQ6NW40 437 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 EP400NLQ6ZTU2 488 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 RFX8Q6ZV50 586 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 UNC5BQ8IZJ1 945 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 NDUFAF2Q8N183 169 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 SIX6OS1Q8N1H7 587 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 SPDL1Q96EA4 605 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 PTCD3Q96EY7 689 aaKnown RBP18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 MED10Q9BTT4 135 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 MECRQ9BV79 373 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 KATNAL1Q9BW62 490 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 PRDM12Q9H4Q4 367 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 PCMTD2Q9NV79 361 aa18.91■□□□□ 0.62
SEMA3B-209ENST00000456560 SYNJ2BP-COX16A0A087WUM0 186 aa18.9■□□□□ 0.62
SEMA3B-209ENST00000456560 HAUS5O94927 633 aa18.9■□□□□ 0.62
SEMA3B-209ENST00000456560 SERPINB3P29508 390 aa18.9■□□□□ 0.62
SEMA3B-209ENST00000456560 MAP3K7CLP57077 242 aa18.9■□□□□ 0.62
SEMA3B-209ENST00000456560 BST1Q10588 318 aa18.9■□□□□ 0.62
SEMA3B-209ENST00000456560 CCNJLQ8IV13 435 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms