RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 USP33Q8TEY7 942 aa8.82□□□□□ -1
SP140-207ENST00000456542 DDI1Q8WTU0 396 aa8.82□□□□□ -1
SP140-207ENST00000456542 NELL1Q92832 810 aa8.82□□□□□ -1
SP140-207ENST00000456542 RNF34Q969K3 372 aa8.82□□□□□ -1
SP140-207ENST00000456542 P2RY11Q96G91 374 aa8.82□□□□□ -1
SP140-207ENST00000456542 FAM126AQ9BYI3 521 aaPredicted RBP8.82□□□□□ -1
SP140-207ENST00000456542 METTL5Q9NRN9 209 aaKnown RBP8.82□□□□□ -1
SP140-207ENST00000456542 PLK2Q9NYY3 685 aa8.82□□□□□ -1
SP140-207ENST00000456542 RAPGEFL1Q9UHV5 662 aa8.82□□□□□ -1
SP140-207ENST00000456542 SLC12A6Q9UHW9 1150 aa8.82□□□□□ -1
SP140-207ENST00000456542 STARD13Q9Y3M8 1113 aa8.82□□□□□ -1
SP140-207ENST00000456542 DOCK4Q8N1I0 1966 aa8.82□□□□□ -1
SP140-207ENST00000456542 TBC1D3BA6NDS4 549 aa8.81□□□□□ -1
SP140-207ENST00000456542 C2CD4BA6NLJ0 364 aa8.81□□□□□ -1
SP140-207ENST00000456542 SIGLEC16A6NMB1 481 aa8.81□□□□□ -1
SP140-207ENST00000456542 H0Y858 1186 aa8.81□□□□□ -1
SP140-207ENST00000456542 DDX3XO00571 662 aaKnown RBP eCLIP8.81□□□□□ -1
SP140-207ENST00000456542 ENDOD1O94919 500 aa8.81□□□□□ -1
SP140-207ENST00000456542 MOCS2O96007 188 aaPredicted RBP8.81□□□□□ -1
SP140-207ENST00000456542 SP9P0CG40 484 aa8.81□□□□□ -1
SP140-207ENST00000456542 CHRM1P11229 460 aaPredicted RBP8.81□□□□□ -1
SP140-207ENST00000456542 KRT3P12035 628 aa8.81□□□□□ -1
SP140-207ENST00000456542 TDGF1P13385 188 aa8.81□□□□□ -1
SP140-207ENST00000456542 HOXA6P31267 233 aa8.81□□□□□ -1
SP140-207ENST00000456542 SDC4P31431 198 aa8.81□□□□□ -1
SP140-207ENST00000456542 RDXP35241 583 aaKnown RBP8.81□□□□□ -1
SP140-207ENST00000456542 CXCR3P49682 368 aa8.81□□□□□ -1
SP140-207ENST00000456542 SATB1Q01826 763 aa8.81□□□□□ -1
SP140-207ENST00000456542 DEUP1Q05D60 604 aa8.81□□□□□ -1
SP140-207ENST00000456542 NME3Q13232 169 aa8.81□□□□□ -1
SP140-207ENST00000456542 EIF4HQ15056 248 aaKnown RBP8.81□□□□□ -1
SP140-207ENST00000456542 MS4A13Q5J8X5 152 aa8.81□□□□□ -1
SP140-207ENST00000456542 C10orf76Q5T2E6 689 aa8.81□□□□□ -1
SP140-207ENST00000456542 TRNP1Q6NT89 227 aa8.81□□□□□ -1
SP140-207ENST00000456542 PKN3Q6P5Z2 889 aa8.81□□□□□ -1
SP140-207ENST00000456542 RFWD3Q6PCD5 774 aa8.81□□□□□ -1
SP140-207ENST00000456542 SND1Q7KZF4 910 aaKnown RBP eCLIP8.81□□□□□ -1
SP140-207ENST00000456542 SYT13Q7L8C5 426 aa8.81□□□□□ -1
SP140-207ENST00000456542 DRC7Q8IY82 874 aa8.81□□□□□ -1
SP140-207ENST00000456542 EMC1Q8N766 993 aa8.81□□□□□ -1
SP140-207ENST00000456542 RPLP0P6Q8NHW5 317 aa8.81□□□□□ -1
SP140-207ENST00000456542 CPLX3Q8WVH0 158 aa8.81□□□□□ -1
SP140-207ENST00000456542 BHMTQ93088 406 aa8.81□□□□□ -1
SP140-207ENST00000456542 CFAP57Q96MR6 1250 aa8.81□□□□□ -1
SP140-207ENST00000456542 PRICKLE1Q96MT3 831 aaPredicted RBP8.81□□□□□ -1
SP140-207ENST00000456542 TBCBQ99426 244 aa8.81□□□□□ -1
SP140-207ENST00000456542 DNAJC7Q99615 494 aa8.81□□□□□ -1
SP140-207ENST00000456542 PRMT1Q99873 361 aaKnown RBP8.81□□□□□ -1
SP140-207ENST00000456542 ANP32EQ9BTT0 268 aa8.81□□□□□ -1
SP140-207ENST00000456542 SELENOOQ9BVL4 669 aa8.81□□□□□ -1
SP140-207ENST00000456542 ADAM33Q9BZ11 813 aa8.81□□□□□ -1
SP140-207ENST00000456542 TRIM5Q9C035 493 aa8.81□□□□□ -1
SP140-207ENST00000456542 WDCPQ9H6R7 721 aa8.81□□□□□ -1
SP140-207ENST00000456542 PIGVQ9NUD9 493 aa8.81□□□□□ -1
SP140-207ENST00000456542 ARHGEF38Q9NXL2 777 aa8.81□□□□□ -1
SP140-207ENST00000456542 CALCOCO1Q9P1Z2 691 aa8.81□□□□□ -1
SP140-207ENST00000456542 XPO7Q9UIA9 1087 aaKnown RBP8.81□□□□□ -1
SP140-207ENST00000456542 EML5Q05BV3 1969 aa8.81□□□□□ -1
SP140-207ENST00000456542 CKAP5Q14008 2032 aa8.8□□□□□ -1
SP140-207ENST00000456542 SPAG17Q6Q759 2223 aa8.8□□□□□ -1
SP140-207ENST00000456542 SYNJ2BP-COX16A0A087WUM0 186 aa8.8□□□□□ -1
SP140-207ENST00000456542 CCDC163A0A0D9SF12 145 aa8.8□□□□□ -1
SP140-207ENST00000456542 GOLGA6L7A0A1B0GV03 622 aa8.8□□□□□ -1
SP140-207ENST00000456542 FAM170AA1A519 330 aa8.8□□□□□ -1
SP140-207ENST00000456542 ANKRD62A6NC57 917 aa8.8□□□□□ -1
SP140-207ENST00000456542 PRRT4C9JH25 899 aa8.8□□□□□ -1
SP140-207ENST00000456542 F5H5T6 163 aa8.8□□□□□ -1
SP140-207ENST00000456542 K7ESF4 209 aa8.8□□□□□ -1
SP140-207ENST00000456542 TRIM24O15164 1050 aa8.8□□□□□ -1
SP140-207ENST00000456542 TSPAN3O60637 253 aa8.8□□□□□ -1
SP140-207ENST00000456542 RTN2O75298 545 aa8.8□□□□□ -1
SP140-207ENST00000456542 PAGE1O75459 146 aa8.8□□□□□ -1
SP140-207ENST00000456542 TPM1P09493 284 aa8.8□□□□□ -1
SP140-207ENST00000456542 MYBL1P10243 752 aa8.8□□□□□ -1
SP140-207ENST00000456542 SKILP12757 684 aa8.8□□□□□ -1
SP140-207ENST00000456542 HNRNPLP14866 589 aaKnown RBP eCLIP8.8□□□□□ -1
SP140-207ENST00000456542 PDGFRAP16234 1089 aa8.8□□□□□ -1
SP140-207ENST00000456542 TFE3P19532 575 aaPredicted RBP8.8□□□□□ -1
SP140-207ENST00000456542 TACR2P21452 398 aa8.8□□□□□ -1
SP140-207ENST00000456542 GPD1P21695 349 aa8.8□□□□□ -1
SP140-207ENST00000456542 RRM1P23921 792 aa8.8□□□□□ -1
SP140-207ENST00000456542 RFC1P35251 1148 aaPredicted RBP8.8□□□□□ -1
SP140-207ENST00000456542 NBL1P41271 181 aa8.8□□□□□ -1
SP140-207ENST00000456542 NRLP54845 237 aa8.8□□□□□ -1
SP140-207ENST00000456542 NHLH1Q02575 133 aa8.8□□□□□ -1
SP140-207ENST00000456542 CSTF1Q05048 431 aaKnown RBP8.8□□□□□ -1
SP140-207ENST00000456542 E2F5Q15329 346 aa8.8□□□□□ -1
SP140-207ENST00000456542 C2orf27AQ580R0 203 aa8.8□□□□□ -1
SP140-207ENST00000456542 EOGTQ5NDL2 527 aa8.8□□□□□ -1
SP140-207ENST00000456542 PPP1R15BQ5SWA1 713 aa8.8□□□□□ -1
SP140-207ENST00000456542 TTC39BQ5VTQ0 682 aaPredicted RBP8.8□□□□□ -1
SP140-207ENST00000456542 RAP1GAP2Q684P5 730 aa8.8□□□□□ -1
SP140-207ENST00000456542 PLEKHA7Q6IQ23 1121 aa8.8□□□□□ -1
SP140-207ENST00000456542 DNAJC24Q6P3W2 148 aa8.8□□□□□ -1
SP140-207ENST00000456542 WDR59Q6PJI9 974 aa8.8□□□□□ -1
SP140-207ENST00000456542 ZC3H14Q6PJT7 736 aaKnown RBP8.8□□□□□ -1
SP140-207ENST00000456542 STRADAQ7RTN6 431 aa8.8□□□□□ -1
SP140-207ENST00000456542 TRMT11Q7Z4G4 463 aaKnown RBP8.8□□□□□ -1
SP140-207ENST00000456542 ANKS1BQ7Z6G8 1248 aa8.8□□□□□ -1
SP140-207ENST00000456542 CHSY1Q86X52 802 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms