RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 RAD54BQ9Y620 910 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 IGHV1OR15-9A0A0B4J2B8 117 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 HSF2BPO75031 334 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 SLC2A3P11169 496 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 PABPC1P11940 636 aaKnown RBP18.55■□□□□ 0.56
MSH6-207ENST00000456246 HLA-FP30511 346 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 RPL6Q02878 288 aaKnown RBP18.55■□□□□ 0.56
MSH6-207ENST00000456246 FUT11Q495W5 492 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 SERPINA13PQ6UXR4 307 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 RABEPKQ7Z6M1 372 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 KIAA0907Q7Z7F0 614 aaPredicted RBP18.55■□□□□ 0.56
MSH6-207ENST00000456246 SYT12Q8IV01 421 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 EDEM2Q9BV94 578 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 FBRSQ9HAH7 460 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 SAMSN1Q9NSI8 373 aaKnown RBP18.55■□□□□ 0.56
MSH6-207ENST00000456246 ABCB8Q9NUT2 735 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 SLC12A6Q9UHW9 1150 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 EVLQ9UI08 416 aaPredicted RBP18.55■□□□□ 0.56
MSH6-207ENST00000456246 PLA2G4CQ9UP65 541 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 NCOR2Q9Y618 2525 aa18.55■□□□□ 0.56
MSH6-207ENST00000456246 CKAP5Q14008 2032 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 SPTBN2O15020 2390 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 WASH3PC4AMC7 463 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 FOXN3O00409 490 aaPredicted RBP18.54■□□□□ 0.56
MSH6-207ENST00000456246 TBL1XO60907 577 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 TRUB2O95900 331 aaKnown RBP18.54■□□□□ 0.56
MSH6-207ENST00000456246 IGLV3-25P01717 112 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 ATP5BP06576 529 aaKnown RBP18.54■□□□□ 0.56
MSH6-207ENST00000456246 CDK17Q00537 523 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 RAPGEF1Q13905 1077 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 HSP90AA4PQ58FG1 418 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 STPG1Q5TH74 334 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 SYPL2Q5VXT5 272 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 RFWD3Q6PCD5 774 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 KIAA1324Q6UXG2 1013 aaKnown RBP18.54■□□□□ 0.56
MSH6-207ENST00000456246 C11orf57Q6ZUT1 292 aaPredicted RBP18.54■□□□□ 0.56
MSH6-207ENST00000456246 CHST9Q7L1S5 443 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 ZDHHC17Q8IUH5 632 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 MFN1Q8IWA4 741 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 TMEFF1Q8IYR6 380 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 PIGKQ92643 395 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 BTN2A3PQ96KV6 586 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 CPXM1Q96SM3 734 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 SYNCQ9H7C4 482 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 PRDM16Q9HAZ2 1276 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.54■□□□□ 0.56
MSH6-207ENST00000456246 DAAM1Q9Y4D1 1078 aa18.54■□□□□ 0.56
MSH6-207ENST00000456246 CNOT1A5YKK6 2376 aaKnown RBP18.53■□□□□ 0.56
MSH6-207ENST00000456246 DCDC2BA2VCK2 349 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 MBD3O95983 291 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 SLC6A4P31645 630 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 CLCN1P35523 988 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 LMAN2Q12907 356 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 DRAP1Q14919 205 aaPredicted RBP18.53■□□□□ 0.56
MSH6-207ENST00000456246 MS4A13Q5J8X5 152 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 KLHDC7AQ5VTJ3 777 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 PEAR1Q5VY43 1037 aaPredicted RBP18.53■□□□□ 0.56
MSH6-207ENST00000456246 TMEM215Q68D42 235 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 NADSYN1Q6IA69 706 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 ADIPOR2Q86V24 386 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 SLC47A2Q86VL8 602 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 PASD1Q8IV76 773 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 WDTC1Q8N5D0 677 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 ATP6V0D2Q8N8Y2 350 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 TMEM35BQ8NCS4 154 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 C1orf131Q8NDD1 294 aaKnown RBP18.53■□□□□ 0.56
MSH6-207ENST00000456246 FIBINQ8TAL6 211 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 CEP76Q8TAP6 659 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 ADAM32Q8TC27 787 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 GPT2Q8TD30 523 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 PRICKLE1Q96MT3 831 aaPredicted RBP18.53■□□□□ 0.56
MSH6-207ENST00000456246 SLC2A13Q96QE2 648 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 SMOC1Q9H4F8 434 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 ANO10Q9NW15 660 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 TMEM51Q9NW97 253 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 TJP2Q9UDY2 1190 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 AJAP1Q9UKB5 411 aaPredicted RBP18.53■□□□□ 0.56
MSH6-207ENST00000456246 CYP8B1Q9UNU6 501 aa18.53■□□□□ 0.56
MSH6-207ENST00000456246 TNRC6BQ9UPQ9 1833 aaKnown RBP18.53■□□□□ 0.56
MSH6-207ENST00000456246 GON4LQ3T8J9 2241 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 GOLGA6L7A0A1B0GV03 622 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 MED19A0JLT2 244 aaPredicted RBP18.52■□□□□ 0.56
MSH6-207ENST00000456246 LNP1A1A4G5 178 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 NDUFS2O75306 463 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 MOCS2O96007 188 aaPredicted RBP18.52■□□□□ 0.56
MSH6-207ENST00000456246 EPHX1P07099 455 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 DLDP09622 509 aaKnown RBP18.52■□□□□ 0.56
MSH6-207ENST00000456246 UCHL3P15374 230 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 POLR2EP19388 210 aaKnown RBP18.52■□□□□ 0.56
MSH6-207ENST00000456246 PRKCHP24723 683 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 OXTRP30559 389 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 CCR1P32246 355 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 PTGER3P43115 390 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 SGSHP51688 502 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 KCNMA1Q12791 1236 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 CDH18Q13634 790 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 FNDC3BQ53EP0 1204 aaKnown RBP18.52■□□□□ 0.56
MSH6-207ENST00000456246 DCAF6Q58WW2 860 aa18.52■□□□□ 0.56
MSH6-207ENST00000456246 MBLAC2Q68D91 279 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms