RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 RASSF3Q86WH2 238 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 FAM160A2Q8N612 972 aaPredicted RBP18.01■□□□□ 0.47
USP39-208ENST00000455732 TSTD1Q8NFU3 115 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 DDI1Q8WTU0 396 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 BAP1Q92560 729 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 RMDN1Q96DB5 314 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 DDX50Q9BQ39 737 aaKnown RBP18.01■□□□□ 0.47
USP39-208ENST00000455732 PARD6AQ9NPB6 346 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 ZDHHC4Q9NPG8 344 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 RRN3Q9NYV6 651 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 PLK2Q9NYY3 685 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 CEP192Q8TEP8 1941 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 PRRT4C9JH25 899 aa18■□□□□ 0.47
USP39-208ENST00000455732 GOLGA6L19H0YKK7 550 aa18■□□□□ 0.47
USP39-208ENST00000455732 GRAP2O75791 330 aa18■□□□□ 0.47
USP39-208ENST00000455732 APOEP02649 317 aa18■□□□□ 0.47
USP39-208ENST00000455732 SLC2A3P11169 496 aa18■□□□□ 0.47
USP39-208ENST00000455732 FERP16591 822 aa18■□□□□ 0.47
USP39-208ENST00000455732 MMP8P22894 467 aa18■□□□□ 0.47
USP39-208ENST00000455732 NOS2P35228 1153 aa18■□□□□ 0.47
USP39-208ENST00000455732 MATKP42679 507 aa18■□□□□ 0.47
USP39-208ENST00000455732 DGKEP52429 567 aa18■□□□□ 0.47
USP39-208ENST00000455732 FANCCQ00597 558 aa18■□□□□ 0.47
USP39-208ENST00000455732 MTA1Q13330 715 aa18■□□□□ 0.47
USP39-208ENST00000455732 FIGNQ5HY92 759 aa18■□□□□ 0.47
USP39-208ENST00000455732 NADSYN1Q6IA69 706 aa18■□□□□ 0.47
USP39-208ENST00000455732 ARCQ7LC44 396 aa18■□□□□ 0.47
USP39-208ENST00000455732 TRMT11Q7Z4G4 463 aaKnown RBP18■□□□□ 0.47
USP39-208ENST00000455732 GPR161Q8N6U8 529 aaKnown RBP18■□□□□ 0.47
USP39-208ENST00000455732 ZNF513Q8N8E2 541 aaPredicted RBP18■□□□□ 0.47
USP39-208ENST00000455732 CPA5Q8WXQ8 436 aa18■□□□□ 0.47
USP39-208ENST00000455732 TMA16Q96EY4 203 aaKnown RBP18■□□□□ 0.47
USP39-208ENST00000455732 TTYH3Q9C0H2 523 aa18■□□□□ 0.47
USP39-208ENST00000455732 FAM204AQ9H8W3 233 aa18■□□□□ 0.47
USP39-208ENST00000455732 TMEM51Q9NW97 253 aa18■□□□□ 0.47
USP39-208ENST00000455732 UNGP13051 313 aaPredicted RBP17.99■□□□□ 0.47
USP39-208ENST00000455732 SLC6A4P31645 630 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 GBP1P32455 592 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 GSCP56915 257 aaPredicted RBP17.99■□□□□ 0.47
USP39-208ENST00000455732 CENPCQ03188 943 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 ZC3H12AQ5D1E8 599 aaKnown RBP17.99■□□□□ 0.47
USP39-208ENST00000455732 EOGTQ5NDL2 527 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 FAM102AQ5T9C2 384 aaPredicted RBP17.99■□□□□ 0.47
USP39-208ENST00000455732 PIK3R6Q5UE93 754 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 DGLUCYQ7Z3D6 616 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 ANKS1BQ7Z6G8 1248 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.99■□□□□ 0.47
USP39-208ENST00000455732 KBTBD6Q86V97 674 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 MDGA1Q8NFP4 955 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 NT5C3BQ969T7 300 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 PGAP3Q96FM1 320 aaPredicted RBP17.99■□□□□ 0.47
USP39-208ENST00000455732 ZC3H10Q96K80 434 aaKnown RBP17.99■□□□□ 0.47
USP39-208ENST00000455732 BTN2A3PQ96KV6 586 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 EDEM3Q9BZQ6 932 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.99■□□□□ 0.47
USP39-208ENST00000455732 DDIT4Q9NX09 232 aa17.99■□□□□ 0.47
USP39-208ENST00000455732 GON4LQ3T8J9 2241 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 KCNU1A8MYU2 1149 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 TSPAN3O60637 253 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 LRP3O75074 770 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 CCR1P32246 355 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 PBX1P40424 430 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 ARID5AQ03989 594 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 SPEM2Q0P670 501 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 PUM1Q14671 1186 aaKnown RBP eCLIP17.98■□□□□ 0.47
USP39-208ENST00000455732 EIF4HQ15056 248 aaKnown RBP17.98■□□□□ 0.47
USP39-208ENST00000455732 NFKBIBQ15653 356 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 CLEC16AQ2KHT3 1053 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 OTUD1Q5VV17 481 aaPredicted RBP17.98■□□□□ 0.47
USP39-208ENST00000455732 ANO7Q6IWH7 933 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 RFWD3Q6PCD5 774 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 IRF2BP2Q7Z5L9 587 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.98■□□□□ 0.47
USP39-208ENST00000455732 ZNF557Q8N988 423 aaPredicted RBP17.98■□□□□ 0.47
USP39-208ENST00000455732 HJURPQ8NCD3 748 aaPredicted RBP17.98■□□□□ 0.47
USP39-208ENST00000455732 PRICKLE1Q96MT3 831 aaPredicted RBP17.98■□□□□ 0.47
USP39-208ENST00000455732 PCDHB18PQ96TA0 734 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 NPY6RQ99463 290 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 SYT11Q9BT88 431 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.98■□□□□ 0.47
USP39-208ENST00000455732 TMEM59LQ9UK28 342 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 CLEC4EQ9ULY5 219 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 STAP1Q9ULZ2 295 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 CKAP5Q14008 2032 aa17.98■□□□□ 0.47
USP39-208ENST00000455732 TNRC6BQ9UPQ9 1833 aaKnown RBP17.98■□□□□ 0.47
USP39-208ENST00000455732 GOLGA6L7A0A1B0GV03 622 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 LRRC53A6NM62 1247 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 NPC1O15118 1278 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 MOCS2O96007 188 aaPredicted RBP17.97■□□□□ 0.47
USP39-208ENST00000455732 NSFP46459 744 aaKnown RBP17.97■□□□□ 0.47
USP39-208ENST00000455732 SGSHP51688 502 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 PTP4A2Q12974 167 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 GEN1Q17RS7 908 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 PLK5Q496M5 336 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 MS4A13Q5J8X5 152 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 EGFLAMQ63HQ2 1017 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 MMS22LQ6ZRQ5 1243 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 PHF13Q86YI8 300 aaPredicted RBP17.97■□□□□ 0.47
USP39-208ENST00000455732 ATP6V0D2Q8N8Y2 350 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 OLIG1Q8TAK6 271 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms