RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SLC16A11Q8NCK7 471 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 ZNF461Q8TAF7 563 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 ETNPPLQ8TBG4 499 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 RUFY2Q8WXA3 655 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 PSPC1Q8WXF1 523 aaKnown RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 RABGGTAQ92696 567 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 SMARCD2Q92925 531 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 GJA10Q969M2 543 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 TMEM143Q96AN5 459 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 TCEAL4Q96EI5 215 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 SGSM3Q96HU1 749 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 AARSD1Q9BTE6 412 aaKnown RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 TEKT3Q9BXF9 490 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 NFKBIZQ9BYH8 718 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 KRTAP17-1Q9BYP8 105 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 LRRC2Q9BYS8 371 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 NXF3Q9H4D5 531 aaKnown RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 C8orf33Q9H7E9 229 aaPredicted RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 C6orf50Q9HD87 102 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 XPNPEP1Q9NQW7 623 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 ARHGEF4Q9NR80 690 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 ST7Q9NRC1 585 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 VPS45Q9NRW7 570 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 RBM12Q9NTZ6 932 aaKnown RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 WRAP73Q9P2S5 460 aaPredicted RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 CACNG4Q9UBN1 327 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 MSRB2Q9Y3D2 182 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 R3HCC1Q9Y3T6 440 aaKnown RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 NEUROG3Q9Y4Z2 214 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 RBM8AQ9Y5S9 174 aaKnown RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 MAST4O15021 2626 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 PATJQ8NI35 1801 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 LNP1A1A4G5 178 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 HEPACAM2A8MVW5 462 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 PATE3B3GLJ2 98 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 SPECC1L-ADORA2AF8WAN1 911 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 ZNF197O14709 1029 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 ZNF263O14978 683 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 ZBTB43O43298 467 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 EXTL3O43909 919 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 RPP40O75818 363 aaKnown RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 ERLIN2O94905 339 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 KNG1P01042 644 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 LTFP02788 710 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 C6P13671 934 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 TACR2P21452 398 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 GNA11P29992 359 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 ARL2P36404 184 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 VIPR2P41587 438 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 QARSP47897 775 aaKnown RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 RBM25P49756 843 aaKnown RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 SELENOPP49908 381 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 ROR1Q01973 937 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 MBTD1Q05BQ5 628 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 MXD4Q14582 209 aaPredicted RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 SKIDA1Q1XH10 827 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 TTC22Q5TAA0 569 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 DAB2IPQ5VWQ8 1189 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 PLA2G4FQ68DD2 849 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 TCEAL6Q6IPX3 200 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 SLC27A1Q6PCB7 646 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 MOXD1Q6UVY6 613 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 SYNE3Q6ZMZ3 975 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 Q6ZUG5 572 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 ANKS3Q6ZW76 656 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 RALGPS2Q86X27 583 aaPredicted RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 CEP57Q86XR8 500 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 RBM12BQ8IXT5 1001 aaKnown RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 C4orf19Q8IY42 314 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 HACE1Q8IYU2 909 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 Q8N1X5 172 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 CAMKK1Q8N5S9 505 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 HASPINQ8TF76 798 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 TCP11Q8WWU5 503 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 TCEAL3Q969E4 200 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 E2F7Q96AV8 911 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 RSPRY1Q96DX4 576 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 CPB2Q96IY4 423 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 CCDC136Q96JN2 1154 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 CEP170P1Q96L14 293 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 LRRC3BQ96PB8 259 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 BBC3Q96PG8 261 aaPredicted RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 CDK5RAP1Q96SZ6 601 aaKnown RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 ZFYVE21Q9BQ24 234 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 EDEM2Q9BV94 578 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 GPR88Q9GZN0 384 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 LSG1Q9H089 658 aaKnown RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 CXCL16Q9H2A7 254 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 RWDD1Q9H446 243 aaPredicted RBP4.05□□□□□ -1.76
RBM39-220ENST00000455343 KCND1Q9NSA2 647 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 ZFP69BQ9UJL9 534 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 ZDHHC9Q9Y397 364 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 CDY1Q9Y6F8 540 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 MYH6P13533 1939 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 KALRNO60229 2985 aa4.05□□□□□ -1.76
RBM39-220ENST00000455343 IGSF10Q6WRI0 2623 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 BCLAF3A2AJT9 711 aaKnown RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 CASTOR2A6NHX0 329 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 SLC38A8A6NNN8 435 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 INO80B-WBP1J3KQ70 363 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms