RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 MYL4P12829 197 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PDCD2Q16342 344 aaPredicted RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 C9orf57Q5W0N0 161 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PLEKHA7Q6IQ23 1121 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PCYOX1LQ8NBM8 494 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RNF217Q8TC41 542 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LRRC39Q96DD0 335 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CDK5RAP1Q96SZ6 601 aaKnown RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 B3GNT5Q9BYG0 378 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LHX5Q9H2C1 402 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PHRF1Q9P1Y6 1649 aaKnown RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 A0A0A0MRY4 1105 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 VPS26AO75436 327 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 VAPBO95292 243 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CRTAMO95727 393 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SMPD1P17405 629 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 BGNP21810 368 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 BRCC3P46736 316 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 HIRAP54198 1017 aaPredicted RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CCL23P55773 120 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 JAM2P57087 298 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CORO7P57737 925 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CDK16Q00536 496 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SH3D19Q5HYK7 790 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 AARS2Q5JTZ9 985 aaKnown RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SPATA13Q96N96 652 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PDZD7Q9H5P4 517 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 GPAMQ9HCL2 828 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DUSP11O75319 330 aaKnown RBP10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PDHA1P08559 390 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TARSP26639 723 aaKnown RBP10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MATKP42679 507 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ARHGDIAP52565 204 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 POU4F1Q01851 419 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 KBTBD12Q3ZCT8 623 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LCLAT1Q6UWP7 414 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ITIH5Q86UX2 942 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LGI2Q8N0V4 545 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CIPCQ9C0C6 399 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PCDHA2Q9Y5H9 948 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 HEATR9A2RTY3 570 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CILPO75339 1184 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 GRK2P25098 689 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TNFRSF8P28908 595 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CYP2C18P33260 490 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 FAAP100Q0VG06 881 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TUSC3Q13454 348 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ITGA7Q13683 1181 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 IKBKEQ14164 716 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CSHL1Q14406 222 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MREGQ8N565 214 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TRIML2Q8N7C3 387 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MYLPFQ96A32 169 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LENG1Q96BZ8 264 aaPredicted RBP10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CCDC126Q96EE4 140 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CENPKQ9BS16 269 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ADGRE3Q9BY15 652 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ETNK2Q9NVF9 386 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DERAQ9Y315 318 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 COQ4Q9Y3A0 265 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PTCH2Q9Y6C5 1203 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SF3B1O75533 1304 aaKnown RBP eCLIP10.3□□□□□ -0.764e-7■■■■■ 133.7
CSGALNACT1-203ENST00000454498 TSPAN1O60635 241 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TSPAN3O60637 253 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DGKIO75912 1065 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 GLP2RO95838 553 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ERCC2P18074 760 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 WEE1P30291 646 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 FLT3P36888 993 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PARP6Q2NL67 630 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SGO1Q5FBB7 561 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SETD3Q86TU7 594 aaPredicted RBP10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 FAM35AQ86V20 835 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ST13P4Q8IZP2 240 aaPredicted RBP10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ALLCQ8N6M5 410 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TOP6BLQ8N6T0 577 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ZNF670Q9BS34 389 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CNGB3Q9NQW8 809 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 AURKCQ9UQB9 309 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DNAJC16Q9Y2G8 782 aa10.3□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CNTNAP1P78357 1384 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ITGAVP06756 1048 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CD151P48509 253 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 NPY2RP49146 381 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ITIH4Q14624 930 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TMEM259Q4ZIN3 620 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SPDYCQ5MJ68 293 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RARS2Q5T160 578 aaKnown RBP10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LAYNQ6UX15 382 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 KCNMB4Q86W47 210 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 FTHL17Q9BXU8 183 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ASPSCR1Q9BZE9 553 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PRKD2Q9BZL6 878 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CLPBQ9H078 707 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 NCKIPSDQ9NZQ3 722 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 THEGQ9P2T0 379 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CTNNAL1Q9UBT7 734 aa10.29□□□□□ -0.76
CSGALNACT1-203ENST00000454498 COG5Q9UP83 839 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms