RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PDGFRAP16234 1089 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 CCDC173Q0VFZ6 552 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 TRIP4Q15650 581 aaPredicted RBP16.29■□□□□ 0.2
VCX3B-204ENST00000453306 ZNF77Q15935 545 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 DAB2IPQ5VWQ8 1189 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 RSRC2Q7L4I2 434 aaKnown RBP16.29■□□□□ 0.2
VCX3B-204ENST00000453306 RNF139Q8WU17 664 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 ANP32BQ92688 251 aaKnown RBP16.29■□□□□ 0.2
VCX3B-204ENST00000453306 FCRL2Q96LA5 508 aaPredicted RBP16.29■□□□□ 0.2
VCX3B-204ENST00000453306 RTKNQ9BST9 563 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 NUP85Q9BW27 656 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 MAGEB5Q9BZ81 275 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 LINC00597Q9H2U6 94 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 TMPRSS4Q9NRS4 437 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 PIGVQ9NUD9 493 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 CFAP97Q9P2B7 532 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 XPO7Q9UIA9 1087 aaKnown RBP16.29■□□□□ 0.2
VCX3B-204ENST00000453306 INTUQ9ULD6 942 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 CACNA1BQ00975 2339 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 OTOGLQ3ZCN5 2332 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 SPECC1L-ADORA2AF8WAN1 911 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 M0QYT0 321 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 CAPN9O14815 690 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 ARHGAP6O43182 974 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 IRAK2O43187 625 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 CCP110O43303 1012 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 PAPSS2O95340 614 aaPredicted RBP16.28■□□□□ 0.2
VCX3B-204ENST00000453306 RETP07949 1114 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 IRF1P10914 325 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 TCF3P15923 654 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 GPD1P21695 349 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 AVPR1AP37288 418 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 ARHGAP25P42331 645 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 ZNF143P52747 638 aaPredicted RBP16.28■□□□□ 0.2
VCX3B-204ENST00000453306 HDAC4P56524 1084 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 ATP11AP98196 1134 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 USP4Q13107 963 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 TCEAL1Q15170 157 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 SPA17Q15506 151 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 SLC25A52Q3SY17 297 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 ZC3H12AQ5D1E8 599 aaKnown RBP16.28■□□□□ 0.2
VCX3B-204ENST00000453306 Q6ZNB5 142 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 PRR23BQ6ZRT6 265 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 SYNPOQ8N3V7 929 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 SLC35G2Q8TBE7 412 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 TRIM11Q96F44 468 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 COL4A2P08572 1712 aa16.28■□□□□ 0.2
VCX3B-204ENST00000453306 ZNF638Q14966 1978 aaKnown RBP16.27■□□□□ 0.2
VCX3B-204ENST00000453306 TICRRQ7Z2Z1 1910 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 SYNJ2BP-COX16A0A087WUM0 186 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 KCNU1A8MYU2 1149 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 PJA2O43164 708 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 FOXD2O60548 495 aaPredicted RBP16.27■□□□□ 0.2
VCX3B-204ENST00000453306 MTA2O94776 668 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 TCF4P15884 667 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 CTHP32929 405 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 PTPN9P43378 593 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 CXCR3P49682 368 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 SULT1E1P49888 294 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 SATB1Q01826 763 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 SIM2Q14190 667 aaPredicted RBP16.27■□□□□ 0.2
VCX3B-204ENST00000453306 C10orf76Q5T2E6 689 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 DCUN1D2Q6PH85 259 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 LONP2Q86WA8 852 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 CCDC112Q8NEF3 446 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 BPIFB1Q8TDL5 484 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 CTNNBL1Q8WYA6 563 aaPredicted RBP16.27■□□□□ 0.2
VCX3B-204ENST00000453306 GOLGA1Q92805 767 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 MYEOVQ96EZ4 313 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 PGAP3Q96FM1 320 aaPredicted RBP16.27■□□□□ 0.2
VCX3B-204ENST00000453306 ZFYVE19Q96K21 471 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 OLA1Q9NTK5 396 aaKnown RBP16.27■□□□□ 0.2
VCX3B-204ENST00000453306 DDIT4Q9NX09 232 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 COX16Q9P0S2 106 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 PYCARDQ9ULZ3 195 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 NCOR2Q9Y618 2525 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 DNAH14Q0VDD8 3507 aa16.27■□□□□ 0.2
VCX3B-204ENST00000453306 CEP250Q9BV73 2442 aa16.27■□□□□ 0.19
VCX3B-204ENST00000453306 MYH10P35580 1976 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 ANAPC1Q9H1A4 1944 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 PTMAP06454 111 aaKnown RBP16.26■□□□□ 0.19
VCX3B-204ENST00000453306 VAV2P52735 878 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 TBX4P57082 545 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 NME3Q13232 169 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 NADSYN1Q6IA69 706 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 CYP4V2Q6ZWL3 525 aaPredicted RBP16.26■□□□□ 0.19
VCX3B-204ENST00000453306 HTR3DQ70Z44 454 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 BBS7Q8IWZ6 715 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 CDK5RAP1Q96SZ6 601 aaKnown RBP16.26■□□□□ 0.19
VCX3B-204ENST00000453306 CNPY3Q9BT09 278 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 NACA2Q9H009 215 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 CTTNBP2NLQ9P2B4 639 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 AGO1Q9UL18 857 aaKnown RBP16.26■□□□□ 0.19
VCX3B-204ENST00000453306 TLR6Q9Y2C9 796 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 HBS1LQ9Y450 684 aaKnown RBP16.26■□□□□ 0.19
VCX3B-204ENST00000453306 SNX10Q9Y5X0 201 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 OBSL1O75147 1896 aa16.26■□□□□ 0.19
VCX3B-204ENST00000453306 TPRP12270 2363 aaKnown RBP16.25■□□□□ 0.19
VCX3B-204ENST00000453306 GOLGA6L7A0A1B0GV03 622 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms