RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 SLC4A11Q8NBS3 891 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 CCDC150Q8NCX0 1101 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 HNRNPLLQ8WVV9 542 aaKnown RBP12.19□□□□□ -0.46
HERC3-207ENST00000452979 BIRC7Q96CA5 298 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 TMEM176AQ96HP8 235 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 LHX5Q9H2C1 402 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 FBRSQ9HAH7 460 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 TMEM8AQ9HCN3 771 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 TM9SF3Q9HD45 589 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 USP25Q9UHP3 1055 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 PLA2G4CQ9UP65 541 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 ANKRD6Q9Y2G4 727 aa12.19□□□□□ -0.46
HERC3-207ENST00000452979 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
HERC3-207ENST00000452979 A0A087WV48 116 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 E9PAM4 449 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 SEMA4FO95754 770 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 ZBED1O96006 694 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 TRIM49P0CI25 452 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 TRIM49CP0CI26 452 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 HLA-EP13747 358 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 NR2F2P24468 414 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 CD27P26842 260 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 GRK6P43250 576 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 TKTL1P51854 596 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 ARID5AQ03989 594 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 TEAD4Q15561 434 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 ZNF394Q53GI3 561 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 KRT39Q6A163 491 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 RSRC2Q7L4I2 434 aaKnown RBP12.18□□□□□ -0.46
HERC3-207ENST00000452979 BHLHA9Q7RTU4 235 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 FMR1NBQ8N0W7 255 aaPredicted RBP12.18□□□□□ -0.46
HERC3-207ENST00000452979 ENGASEQ8NFI3 743 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 WFIKKN2Q8TEU8 576 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 IGSF8Q969P0 613 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 BBC3Q96PG8 261 aaPredicted RBP12.18□□□□□ -0.46
HERC3-207ENST00000452979 ARID3AQ99856 593 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 ORAI3Q9BRQ5 295 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 IRX2Q9BZI1 471 aaPredicted RBP12.18□□□□□ -0.46
HERC3-207ENST00000452979 PRSS16Q9NQE7 514 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 CISHQ9NSE2 258 aa12.18□□□□□ -0.46
HERC3-207ENST00000452979 OLA1Q9NTK5 396 aaKnown RBP12.18□□□□□ -0.46
HERC3-207ENST00000452979 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.18□□□□□ -0.46
HERC3-207ENST00000452979 HBS1LQ9Y450 684 aaKnown RBP12.18□□□□□ -0.46
HERC3-207ENST00000452979 TP53BP1Q12888 1972 aaPredicted RBP12.18□□□□□ -0.46
HERC3-207ENST00000452979 GOLGA6L4A6NEF3 574 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 DFNA5O60443 496 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 LATS1O95835 1130 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 KRT13P13646 458 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 RPL13P26373 211 aaKnown RBP12.17□□□□□ -0.46
HERC3-207ENST00000452979 PSMC2P35998 433 aaKnown RBP12.17□□□□□ -0.46
HERC3-207ENST00000452979 CTSKP43235 329 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 HARS2P49590 506 aaKnown RBP12.17□□□□□ -0.46
HERC3-207ENST00000452979 SLC8A3P57103 927 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 CYP4F3Q08477 520 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 ADGRF1Q5T601 910 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 CACUL1Q86Y37 369 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 FMNL3Q8IVF7 1028 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 SCUBE3Q8IX30 993 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 FAM186BQ8IYM0 893 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 AHI1Q8N157 1196 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
HERC3-207ENST00000452979 GPT2Q8TD30 523 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 CYB5D2Q8WUJ1 264 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 GOLGA1Q92805 767 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 SEMA4DQ92854 862 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 TMA16Q96EY4 203 aaKnown RBP12.17□□□□□ -0.46
HERC3-207ENST00000452979 LRIG1Q96JA1 1093 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 BTBD1Q9H0C5 482 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 SGK2Q9HBY8 427 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 SUN2Q9UH99 717 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 NUMA1Q14980 2115 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 PLXNA2O75051 1894 aa12.17□□□□□ -0.46
HERC3-207ENST00000452979 C10orf142B7Z368 130 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 H0Y8X5 98 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 GOLGA6L22H0YM25 854 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 KCNK3O14649 394 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 XPO1O14980 1071 aaKnown RBP12.16□□□□□ -0.46
HERC3-207ENST00000452979 RHOBTB3O94955 611 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 DNTTP04053 509 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 DLDP09622 509 aaKnown RBP12.16□□□□□ -0.46
HERC3-207ENST00000452979 SYKP43405 635 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 ADAM9Q13443 819 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 FNDC3BQ53EP0 1204 aaKnown RBP12.16□□□□□ -0.46
HERC3-207ENST00000452979 KCNT1Q5JUK3 1230 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 MPP7Q5T2T1 576 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 BSPRYQ5W0U4 402 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 CHST9Q7L1S5 443 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 MARCH9Q86YJ5 346 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 ZC3H3Q8IXZ2 948 aaKnown RBP12.16□□□□□ -0.46
HERC3-207ENST00000452979 SCML4Q8N228 414 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 FBXL13Q8NEE6 735 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 SNX19Q92543 992 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 NDRG1Q92597 394 aaKnown RBP12.16□□□□□ -0.46
HERC3-207ENST00000452979 ULBP1Q9BZM6 244 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 RSPH9Q9H1X1 276 aaPredicted RBP12.16□□□□□ -0.46
HERC3-207ENST00000452979 RAB20Q9NX57 234 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 GGA2Q9UJY4 613 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 SCML1Q9UN30 329 aa12.16□□□□□ -0.46
HERC3-207ENST00000452979 GOLGA8CPA6NN73 597 aa12.15□□□□□ -0.46
HERC3-207ENST00000452979 YJEFN3A6XGL0 299 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms