RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 SLC11A2P49281 568 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 DGKEP52429 567 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 SNX16P57768 344 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 CDK17Q00537 523 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 SKOR2Q2VWA4 1001 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 C2CD6Q53TS8 623 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 NAA35Q5VZE5 725 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 ERICH1Q86X53 443 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 WFDC5Q8TCV5 224 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 GABRG3Q99928 467 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 NUCKS1Q9H1E3 243 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 ANLNQ9NQW6 1124 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 THAP10Q9P2Z0 257 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 MYO6Q9UM54 1294 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 CEP83Q9Y592 693 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 SDK1Q7Z5N4 2213 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 TCRBV5S1A1TA0A578 114 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 CAPN9O14815 690 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 AXIN1O15169 862 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 CAVIN2O95810 425 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 CYBBP04839 570 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 NTSR1P30989 418 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 MS4A13Q5J8X5 152 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 EOGTQ5NDL2 527 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 ADIPOR2Q86V24 386 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 ZNF513Q8N8E2 541 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 DDI1Q8WTU0 396 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 GAB3Q8WWW8 586 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 BTN2A3PQ96KV6 586 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 SPAG5Q96R06 1193 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.72■□□□□ 0.273e-6■■■■□ 24.5
SCAMP4-205ENST00000452128 ELOVL2Q9NXB9 296 aa16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 SMG5Q9UPR3 1016 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-205ENST00000452128 TIMM44O43615 452 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 ENDOD1O94919 500 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 FLT3P36888 993 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 CXCR3P49682 368 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 GSCP56915 257 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 RPS24P62847 133 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 CENPCQ03188 943 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 CLEC16AQ2KHT3 1053 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 C5orf22Q49AR2 442 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 TRIM72Q6ZMU5 477 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 NUDT18Q6ZVK8 323 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 PHF13Q86YI8 300 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 MDGA1Q8NFP4 955 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 SLC30A5Q8TAD4 765 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 FIBINQ8TAL6 211 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 IPO4Q8TEX9 1081 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 ZC3H10Q96K80 434 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 EDEM3Q9BZQ6 932 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 RRN3Q9NYV6 651 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 AIPL1Q9NZN9 384 aa16.71■□□□□ 0.27
SCAMP4-205ENST00000452128 WASH3PC4AMC7 463 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 FANCCQ00597 558 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 SLC25A52Q3SY17 297 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 FIGNQ5HY92 759 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 KIAA1211LQ6NV74 962 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 ZNF683Q8IZ20 524 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 DCLK2Q8N568 766 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 TSTD1Q8NFU3 115 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 RUBCNQ92622 972 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 AGPAT1Q99943 283 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 PIGVQ9NUD9 493 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 DDIT4Q9NX09 232 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 ARHGEF38Q9NXL2 777 aa16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 INTS6Q9UL03 887 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-205ENST00000452128 DMXL1Q9Y485 3027 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 NPC1O15118 1278 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 TBL1XO60907 577 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 SLC2A3P11169 496 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 TACR2P21452 398 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 CCR1P32246 355 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 SIM2Q14190 667 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 EIF4HQ15056 248 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 PTPRNQ16849 979 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 FSCBQ5H9T9 825 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 MMS22LQ6ZRQ5 1243 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 TRMT11Q7Z4G4 463 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 ANKS1BQ7Z6G8 1248 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 SORCS1Q8WY21 1168 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 TTC17Q96AE7 1141 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 PCMTD1Q96MG8 357 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 DDX50Q9BQ39 737 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 PDCL3Q9H2J4 239 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 SYNCQ9H7C4 482 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 STON1Q9Y6Q2 735 aa16.69■□□□□ 0.26
SCAMP4-205ENST00000452128 CEP250Q9BV73 2442 aa16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 SPTBN4Q9H254 2564 aa16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 FAM170AA1A519 330 aa16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 M0QYT0 321 aa16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 DCLK1O15075 740 aa16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 ADCY5O95622 1261 aa16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 FERP16591 822 aa16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 GABRG2P18507 467 aa16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 GBP1P32455 592 aa16.68■□□□□ 0.26
SCAMP4-205ENST00000452128 CD70P32970 193 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms