RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 SPTBN2O15020 2390 aa22.54■■□□□ 1.2
C9orf3-208ENST00000451893 A0A1W2PQF6 199 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 LNP1A1A4G5 178 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 PATE3B3GLJ2 98 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 LTFP02788 710 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 ADRB1P08588 477 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 CHRM1P11229 460 aaPredicted RBP22.53■■□□□ 1.2
C9orf3-208ENST00000451893 PTGER3P43115 390 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 SLC11A2P49281 568 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 EIF4HQ15056 248 aaKnown RBP22.53■■□□□ 1.2
C9orf3-208ENST00000451893 GEN1Q17RS7 908 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 NUGGCQ68CJ6 796 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 KIAA1211LQ6NV74 962 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 CCDC117Q8IWD4 279 aaPredicted RBP22.53■■□□□ 1.2
C9orf3-208ENST00000451893 UNC45BQ8IWX7 931 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 RGL4Q8IZJ4 473 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 SCML4Q8N228 414 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 TMA16Q96EY4 203 aaKnown RBP22.53■■□□□ 1.2
C9orf3-208ENST00000451893 HSFY1Q96LI6 401 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 FAM81BQ96LP2 452 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 SLC2A11Q9BYW1 496 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 NDST4Q9H3R1 872 aa22.53■■□□□ 1.2
C9orf3-208ENST00000451893 DNAH14Q0VDD8 3507 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 WASH3PC4AMC7 463 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 RNF225M0QZC1 329 aaPredicted RBP22.52■■□□□ 1.2
C9orf3-208ENST00000451893 CAPN9O14815 690 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 TEX33O43247 280 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 SART1O43290 800 aaKnown RBP22.52■■□□□ 1.2
C9orf3-208ENST00000451893 THAP12O43422 761 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 NRDCO43847 1150 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 TPM1P09493 284 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 ACADMP11310 421 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 NCAM1P13591 858 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 TBX2Q13207 712 aaPredicted RBP22.52■■□□□ 1.2
C9orf3-208ENST00000451893 SERPINA13PQ6UXR4 307 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 RABEPKQ7Z6M1 372 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 LMO3Q8TAP4 145 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 SLC35F5Q8WV83 523 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 ERGIC2Q96RQ1 377 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 DDX50Q9BQ39 737 aaKnown RBP22.52■■□□□ 1.2
C9orf3-208ENST00000451893 NUP58Q9BVL2 599 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 PRDM16Q9HAZ2 1276 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 ELOVL2Q9NXB9 296 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 FBXO10Q9UK96 956 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 HCN2Q9UL51 889 aa22.52■■□□□ 1.2
C9orf3-208ENST00000451893 LATS1O95835 1130 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 CALCAP01258 141 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 ACADSBP45954 432 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 MAPK8P45983 427 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 ZNF132P52740 706 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 TBX4P57082 545 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 ZNF33AQ06730 810 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 PKDCCQ504Y2 493 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 FNDC3BQ53EP0 1204 aaKnown RBP22.51■■□□□ 1.19
C9orf3-208ENST00000451893 MIIPQ5JXC2 388 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 ADGRF1Q5T601 910 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 ENOSF1Q7L5Y1 443 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 BHLHA9Q7RTU4 235 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 CRACR2AQ9BSW2 395 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 TRIM62Q9BVG3 475 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 THAP10Q9P2Z0 257 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-208ENST00000451893 PLA2G4CQ9UP65 541 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 PI4KAP42356 2102 aa22.51■■□□□ 1.19
C9orf3-208ENST00000451893 IGHV1OR15-9A0A0B4J2B8 117 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 TIMM44O43615 452 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 EPHX1P07099 455 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 ITPKAP23677 461 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 GNA15P30679 374 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 IL12RB1P42701 662 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 NOVA1P51513 510 aaKnown RBP22.5■■□□□ 1.19
C9orf3-208ENST00000451893 IRX4P78413 519 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 ZNF234Q14588 700 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 ARHGAP44Q17R89 818 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 SYCP2LQ5T4T6 812 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 GBP6Q6ZN66 633 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 CEP76Q8TAP6 659 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 WFIKKN2Q8TEU8 576 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 CLEC4CQ8WTT0 213 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 PRCCQ92733 491 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-208ENST00000451893 MRGPRX1Q96LB2 322 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 SERPINB11Q96P15 392 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 LSM14BQ9BX40 385 aaKnown RBP22.5■■□□□ 1.19
C9orf3-208ENST00000451893 SLC6A17Q9H1V8 727 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 EVLQ9UI08 416 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-208ENST00000451893 GON4LQ3T8J9 2241 aa22.5■■□□□ 1.19
C9orf3-208ENST00000451893 TNRC6BQ9UPQ9 1833 aaKnown RBP22.5■■□□□ 1.19
C9orf3-208ENST00000451893 MEI4A8MW99 385 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 PES1O00541 588 aaKnown RBP22.49■■□□□ 1.19
C9orf3-208ENST00000451893 DUOXA1Q1HG43 343 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 FUT11Q495W5 492 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 PSAPL1Q6NUJ1 521 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 MSANTD2Q6P1R3 559 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 ZSCAN30Q86W11 494 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 CACUL1Q86Y37 369 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 FAM217AQ8IXS0 508 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 ZNF557Q8N988 423 aaPredicted RBP22.49■■□□□ 1.19
C9orf3-208ENST00000451893 PIWIL1Q96J94 861 aaKnown RBP22.49■■□□□ 1.19
C9orf3-208ENST00000451893 HSPA12BQ96MM6 686 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 KREMEN1Q96MU8 473 aa22.49■■□□□ 1.19
C9orf3-208ENST00000451893 GTPBP2Q9BX10 602 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms