RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 SERPINA13PQ6UXR4 307 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 LPCAT2Q7L5N7 544 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 CHSY1Q86X52 802 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 CIR1Q86X95 450 aaPredicted RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 MFN1Q8IWA4 741 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 UNC45BQ8IWX7 931 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 CFAP52Q8N1V2 620 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 OLIG1Q8TAK6 271 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 NETO1Q8TDF5 533 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 RNF34Q969K3 372 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 MYEOVQ96EZ4 313 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 LOXL4Q96JB6 756 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 PPP1R13BQ96KQ4 1090 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 GABRG3Q99928 467 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 EDEM2Q9BV94 578 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 SLC4A5Q9BY07 1137 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 DLL3Q9NYJ7 618 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 XPO7Q9UIA9 1087 aaKnown RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 GGA2Q9UJY4 613 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 FBXO10Q9UK96 956 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 SLC27A6Q9Y2P4 619 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 PLXNA2O75051 1894 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 BCLAF3A2AJT9 711 aaKnown RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 IRAK2O43187 625 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 SYNCRIPO60506 623 aaKnown RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 LATS1O95835 1130 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 TRUB2O95900 331 aaKnown RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 TPM2P07951 284 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 ZNF806P0C7X5 589 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 PABPC1P11940 636 aaKnown RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 EEF1GP26641 437 aaKnown RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 CD70P32970 193 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 GGCXP38435 758 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 RNASE9P60153 205 aaKnown RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 RPS24P62847 133 aaKnown RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 YWHAZP63104 245 aaKnown RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 NME3Q13232 169 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 KRT31Q15323 416 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 STX1AQ16623 288 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 MAP7D1Q3KQU3 841 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 FUT11Q495W5 492 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 PTPN20Q4JDL3 420 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 C2CD6Q53TS8 623 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 ZC3H12AQ5D1E8 599 aaKnown RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 PLA2G2CQ5R387 149 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 PIK3R6Q5UE93 754 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 KLHDC7AQ5VTJ3 777 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 IL31Q6EBC2 164 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 C11orf74Q86VG3 221 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 LGI2Q8N0V4 545 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 DEFB106AQ8N104 65 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 WDTC1Q8N5D0 677 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 HJURPQ8NCD3 748 aaPredicted RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 KCNV2Q8TDN2 545 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 NOX5Q96PH1 765 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 NLRC4Q9NPP4 1024 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 FSCN3Q9NQT6 498 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 VPS45Q9NRW7 570 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 FAM207AQ9NSI2 230 aaPredicted RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 FANCLQ9NW38 375 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 DDIT4Q9NX09 232 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 ELOVL2Q9NXB9 296 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 THAP10Q9P2Z0 257 aaPredicted RBP10.05□□□□□ -0.8
USP54-207ENST00000451492 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 TLR6Q9Y2C9 796 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 PCDHGA5Q9Y5G8 931 aa10.05□□□□□ -0.8
USP54-207ENST00000451492 TMEM131Q92545 1883 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 IGHV1OR15-9A0A0B4J2B8 117 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 F8VZ95 297 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 H0Y626 953 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 GOLGA8SH3BPF8 625 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 AP5Z1O43299 807 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 NDUFS2O75306 463 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 GFPT2O94808 682 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 MMEP08473 750 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 UCHL3P15374 230 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 CYP11B1P15538 503 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 SDHBP21912 280 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 ITPKAP23677 461 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 RPL34P49207 117 aaKnown RBP10.04□□□□□ -0.8
USP54-207ENST00000451492 ZNF445P59923 1031 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 RING1Q06587 406 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 LMAN2Q12907 356 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 CDH18Q13634 790 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 BYSLQ13895 437 aaKnown RBP10.04□□□□□ -0.8
USP54-207ENST00000451492 MEA1Q16626 185 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 FKBP15Q5T1M5 1219 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 CCDC183Q5T5S1 534 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 CDKAL1Q5VV42 579 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 LYSMD4Q5XG99 296 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 MBLAC2Q68D91 279 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 RNF43Q68DV7 783 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 DPY19L2P1Q6NXN4 242 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 MMS22LQ6ZRQ5 1243 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 ERMP1Q7Z2K6 904 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 TMEM110Q86TL2 294 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 NOP9Q86U38 636 aaKnown RBP10.04□□□□□ -0.8
USP54-207ENST00000451492 FAM124AQ86V42 546 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms