RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 C22orf23Q9BZE7 217 aa5.05□□□□□ -1.6
GTF3C3-207ENST00000451088 MS4A7Q9GZW8 240 aaPredicted RBP5.05□□□□□ -1.6
GTF3C3-207ENST00000451088 XPNPEP3Q9NQH7 507 aa5.05□□□□□ -1.6
GTF3C3-207ENST00000451088 TRMT13Q9NUP7 481 aaKnown RBP5.05□□□□□ -1.6
GTF3C3-207ENST00000451088 BTBD3Q9Y2F9 522 aa5.05□□□□□ -1.6
GTF3C3-207ENST00000451088 SNX14Q9Y5W7 946 aa5.05□□□□□ -1.6
GTF3C3-207ENST00000451088 SPTBN5Q9NRC6 3674 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 ZNF646O15015 1829 aaPredicted RBP5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 NUP98P52948 1817 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 DOCK3Q8IZD9 2030 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 ALPK3Q96L96 1907 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 CAPN8A6NHC0 703 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 FAM227AF5H4B4 570 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 SMIM22K7EJ46 135 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 TBX3O15119 743 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 TUBB4AP04350 444 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 PRKCBP05771 671 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 EIF2S2P20042 333 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 KELP23276 732 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 GPTP24298 496 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 EPHB2P29323 1055 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 PRKG1Q13976 671 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 NFE2Q16621 373 aaPredicted RBP5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 CYP1B1Q16678 543 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 LY6KQ17RY6 165 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 MTX3Q5HYI7 312 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 FAM102BQ5T8I3 360 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 ZNF626Q68DY1 528 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 KIRREL2Q6UWL6 708 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 ARMC9Q7Z3E5 817 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 CAND1Q86VP6 1230 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 CHSY1Q86X52 802 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 ZNF34Q8IZ26 560 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 BPIFB1Q8TDL5 484 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 DAZAP1Q96EP5 407 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 SUCLG2Q96I99 432 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 ZNF518BQ9C0D4 1074 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 DBNDD1Q9H9R9 158 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 L1RE1Q9UN81 338 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 SCN9AQ15858 1988 aa5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 TCF20Q9UGU0 1960 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-207ENST00000451088 SH3TC1Q8TE82 1336 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 TMEM233B4DJY2 109 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 PPP6CO00743 305 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 PRPF3O43395 683 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 FRS3O43559 492 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 TBC1D4O60343 1298 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 NTSR2O95665 410 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 MYBP10242 640 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 MPGP29372 298 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 NF2P35240 595 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 PLEKHG6Q3KR16 790 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 CEP78Q5JTW2 689 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 SLC10A5Q5PT55 438 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 SUSD4Q5VX71 490 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 SLC9A4Q6AI14 798 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 NXNQ6DKJ4 435 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 C11orf87Q6NUJ2 197 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 CATSPERGQ6ZRH7 1159 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 YTHDF3Q7Z739 585 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 MICU3Q86XE3 530 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 TDHQ8IZJ6 230 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 C8orf58Q8NAV2 365 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 PPP2R3CQ969Q6 453 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 RITA1Q96K30 269 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 SNX18Q96RF0 628 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 THUMPD2Q9BTF0 503 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 A1CFQ9NQ94 594 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 HYPKQ9NX55 129 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 ZSCAN32Q9NX65 697 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 DBF4Q9UBU7 674 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 TRMT112Q9UI30 125 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 ZNF609O15014 1411 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 ABCC12Q96J65 1359 aa5.03□□□□□ -1.6
GTF3C3-207ENST00000451088 PTPRZ1P23471 2315 aaPredicted RBP5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 UBN2Q6ZU65 1347 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 PRUNE2Q8WUY3 3088 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 CHL1O00533 1208 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 PDE8BO95263 885 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 CYP2D6P10635 497 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 CCL5P13501 91 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 SLC7A1P30825 629 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 PRKAG1P54619 331 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 DDX10Q13206 875 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 CNN3Q15417 329 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 MINDY4Q4G0A6 757 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 CERCAMQ5T4B2 595 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 DCAF12L1Q5VU92 463 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 MORN5Q5VZ52 161 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 COPS6Q7L5N1 327 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 TCEAL8Q8IYN2 117 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 CHPFQ8IZ52 775 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 MPP5Q8N3R9 675 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 TERB1Q8NA31 727 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 OR56A3Q8NH54 315 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 MAFAQ8NHW3 353 aaPredicted RBP5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 TMEM171Q8WVE6 324 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 NMD3Q96D46 503 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 CLMNQ96JQ2 1002 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 PKNOX2Q96KN3 472 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms