RNA–Protein interactions for RNA: ENST00000450720.5

ALMS1P1-202, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1P1, Length 1,601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-202ENST00000450720 BNIPLQ7Z465 357 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 LGI2Q8N0V4 545 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 CPXM2Q8N436 756 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 FNIP1Q8TF40 1166 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 FAM3CQ92520 227 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 CENPIQ92674 756 aaPredicted RBP17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 TMA16Q96EY4 203 aaKnown RBP17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 TBC1D17Q9HA65 648 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 ANLNQ9NQW6 1124 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 TMEM51Q9NW97 253 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 ARHGEF38Q9NXL2 777 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 UVRAGQ9P2Y5 699 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 STOML2Q9UJZ1 356 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 TYW5A2RUC4 315 aaKnown RBP17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 FAM86C2PA6NEL3 165 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 F5H5T6 163 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 MYO1FO00160 1098 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 TACR2P21452 398 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 ZNF252P-AS1Q0IIN9 211 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 MTA1Q13330 715 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 PON2Q15165 354 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 MPPE1Q53F39 396 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 MS4A13Q5J8X5 152 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 PIK3R6Q5UE93 754 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 FAM217AQ8IXS0 508 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 ACRBPQ8NEB7 543 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 SLC35G2Q8TBE7 412 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 CHFRQ96EP1 664 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 MSANTD3Q96H12 275 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 OSGEPQ9NPF4 335 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 STIM2Q9P246 746 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 IP6K2Q9UHH9 426 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 TFR2Q9UP52 801 aa17.1■□□□□ 0.33
ALMS1P1-202ENST00000450720 TMEM110-MUSTN1A8MSY1 372 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 HOXC11O43248 304 aaPredicted RBP17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 TBL1XO60907 577 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 SGSHP51688 502 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 DAB2IPQ5VWQ8 1189 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 C12orf40Q86WS4 652 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 LRRC8AQ8IWT6 810 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 CFAP52Q8N1V2 620 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 CCDC185Q8N715 623 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 CCDC112Q8NEF3 446 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 XPO6Q96QU8 1125 aaKnown RBP17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 P2RY13Q9BPV8 354 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 DESI2Q9BSY9 194 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 FOXQ1Q9C009 403 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 DNAJC17Q9NVM6 304 aaKnown RBP17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 PCSK1NQ9UHG2 260 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 INTUQ9ULD6 942 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 VANGL2Q9ULK5 521 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 MRPS17Q9Y2R5 130 aaKnown RBP17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 SNX10Q9Y5X0 201 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 HS3ST4Q9Y661 456 aa17.09■□□□□ 0.33
ALMS1P1-202ENST00000450720 KANSL1LA0AUZ9 987 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 I6L893 689 aaPredicted RBP17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 NRDCO43847 1150 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 ADRA1BP35368 520 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 SSR1P43307 286 aaKnown RBP17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 SLC6A11P48066 632 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 MLLT6P55198 1093 aaPredicted RBP17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 STARD6P59095 220 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 RPS24P62847 133 aaKnown RBP17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 KDSRQ06136 332 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 PIGHQ14442 188 aaPredicted RBP17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 GAB4Q2WGN9 574 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 FYB2Q5VWT5 728 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 C1orf228Q6PIY5 440 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 SLFN11Q7Z7L1 901 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 KIAA1328Q86T90 577 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 RHOT2Q8IXI1 618 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 HJURPQ8NCD3 748 aaPredicted RBP17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 RFFLQ8WZ73 363 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 CD101Q93033 1021 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 EXOC4Q96A65 974 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 PBXIP1Q96AQ6 731 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 MYEOVQ96EZ4 313 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 PRICKLE1Q96MT3 831 aaPredicted RBP17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 RPRD1AQ96P16 312 aaPredicted RBP17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 MARK1Q9P0L2 795 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 COL4A2P08572 1712 aa17.08■□□□□ 0.32
ALMS1P1-202ENST00000450720 PRPSAP2O60256 369 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 SRGAP2O75044 1071 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 TULP3O75386 442 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 PENKP01210 267 aaPredicted RBP17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 OPRD1P41143 372 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 NOP2P46087 812 aaKnown RBP17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 GALK1P51570 392 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 KRT83P78385 493 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 GRSF1Q12849 480 aaKnown RBP eCLIP17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 AUHQ13825 339 aaKnown RBP17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 FBXL22Q6P050 247 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 P2RY11Q96G91 374 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 DEC1Q9P2X7 70 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 FAM170BA6NMN3 283 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 CACNG3O60359 315 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 LRCH4O75427 683 aa17.07■□□□□ 0.32
ALMS1P1-202ENST00000450720 TARSP26639 723 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms