RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TRIM64BA6NI03 449 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 SFI1A8K8P3 1242 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 E7ESA3 106 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 PSMD11O00231 422 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 TPPPO94811 219 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 PROSCO94903 275 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 ERBB2P04626 1255 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 BPGMP07738 259 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 KRT10P13645 584 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 TSHRP16473 764 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 XRCC1P18887 633 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 NCF2P19878 526 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 GNL1P36915 607 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 TUFMP49411 452 aaKnown RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 GPC3P51654 580 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 TPTEP56180 551 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 TAS2R40P59535 323 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 IFITM2Q01629 132 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 TRAF2Q12933 501 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 NFX1Q12986 1120 aaKnown RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 SELENBP1Q13228 472 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 IKBKEQ14164 716 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 ZNF618Q5T7W0 954 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 C12orf60Q5U649 245 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 TTC39BQ5VTQ0 682 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 TRIM72Q6ZMU5 477 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 TMEM26Q6ZUK4 368 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 ZNF354CQ86Y25 554 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 LRRC49Q8IUZ0 686 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 ZNF444Q8N0Y2 327 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 MYO1HQ8N1T3 1032 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 PHTF2Q8N3S3 785 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 FAM47BQ8NA70 645 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 PDCD6IPQ8WUM4 868 aaKnown RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 ACDQ96AP0 544 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 ZNF778Q96MU6 729 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 NPLQ9BXD5 320 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 SLC13A1Q9BZW2 595 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 COQ10BQ9H8M1 238 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 CNGB3Q9NQW8 809 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 AGPAT3Q9NRZ7 376 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 DMAC2Q9NW81 257 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 ANKMY1Q9P2S6 941 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 PTBP2Q9UKA9 531 aaKnown RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 A6NL46 340 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 NOP56O00567 594 aaKnown RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 RGS13O14921 159 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 CLOCKO15516 846 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 DCXO43602 365 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 NOL3O60936 208 aaKnown RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 RNASEH2AO75792 299 aaKnown RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 KRT37O76014 449 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 ZNF182P17025 639 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 ATF7P17544 494 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 GAP43P17677 238 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 RPL10P27635 214 aaKnown RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 IDH3AP50213 366 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 NUDT2P50583 147 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 NFATC3Q12968 1075 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 EPC2Q52LR7 807 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 SIGIRRQ6IA17 410 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 C16orf46Q6P387 395 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 BNC2Q6ZN30 1099 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 RNF135Q8IUD6 432 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 PDIK1LQ8N165 341 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 SIX6OS1Q8N1H7 587 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 SPERTQ8NA61 448 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 MINDY2Q8NBR6 621 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 NEDD1Q8NHV4 660 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 CAPSLQ8WWF8 208 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 CPT1BQ92523 772 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 FAR2Q96K12 515 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 TMEM121Q9BTD3 319 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 SMARCAD1Q9H4L7 1026 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 AVENQ9NQS1 362 aaPredicted RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 KLHL11Q9NVR0 708 aa8.85□□□□□ -0.99
LSM5-208ENST00000450169 DRG1Q9Y295 367 aaKnown RBP8.85□□□□□ -0.99
LSM5-208ENST00000450169 LOC105371267A0A1B0GV96 52 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 GOLGA8CPA6NN73 597 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 FAM155AB1AL88 458 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 RIMBP2O15034 1052 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 SPAG6O75602 509 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 LYPLA1O75608 230 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 TOM1L1O75674 476 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 ITGAVP06756 1048 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 SNRPAP09012 282 aaKnown RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 WEE2P0C1S8 567 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MSX2P35548 267 aaPredicted RBP8.84□□□□□ -0.99
LSM5-208ENST00000450169 KRT76Q01546 638 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 CHRNDQ07001 517 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 PMS2P3Q13401 168 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 TRPC3Q13507 836 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 RAB39AQ14964 217 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 FAM47CQ5HY64 1035 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MORN1Q5T089 497 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 C16orf89Q6UX73 402 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 RFPL4BQ6ZWI9 263 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 MAVSQ7Z434 540 aa8.84□□□□□ -0.99
LSM5-208ENST00000450169 SLC26A11Q86WA9 606 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms