RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ENPP2Q13822 863 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 FUT11Q495W5 492 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 CT47A1Q5JQC4 288 aaPredicted RBP15.87■□□□□ 0.13
CHD3-205ENST00000449744 MPP7Q5T2T1 576 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 SYPL2Q5VXT5 272 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 TAC4Q86UU9 113 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 PASD1Q8IV76 773 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 AHI1Q8N157 1196 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 HJURPQ8NCD3 748 aaPredicted RBP15.87■□□□□ 0.13
CHD3-205ENST00000449744 SORCS1Q8WY21 1168 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 FCRL2Q96LA5 508 aaPredicted RBP15.87■□□□□ 0.13
CHD3-205ENST00000449744 GBP4Q96PP9 640 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 NUSAP1Q9BXS6 441 aaKnown RBP15.87■□□□□ 0.13
CHD3-205ENST00000449744 SLC6A17Q9H1V8 727 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 PRDM16Q9HAZ2 1276 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 SIX2Q9NPC8 291 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 LMBRD1Q9NUN5 540 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 STIM2Q9P246 746 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 CYTH4Q9UIA0 394 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 GGA2Q9UJY4 613 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 PLA2G4CQ9UP65 541 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 CEP83Q9Y592 693 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 NUP205Q92621 2012 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 PLXND1Q9Y4D7 1925 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 LNP1A1A4G5 178 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 PATE3B3GLJ2 98 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 KCNJ18B7U540 433 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 MOCS2O96007 188 aaPredicted RBP15.86■□□□□ 0.13
CHD3-205ENST00000449744 ATP5BP06576 529 aaKnown RBP15.86■□□□□ 0.13
CHD3-205ENST00000449744 SLC6A4P31645 630 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 SGSHP51688 502 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 ZNF33AQ06730 810 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 LMAN2Q12907 356 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 KCNJ12Q14500 433 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 FNDC3BQ53EP0 1204 aaKnown RBP15.86■□□□□ 0.13
CHD3-205ENST00000449744 FAM133BQ5BKY9 247 aaKnown RBP15.86■□□□□ 0.13
CHD3-205ENST00000449744 TRIM61Q5EBN2 209 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 DAB2IPQ5VWQ8 1189 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 TMEM215Q68D42 235 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 MFN1Q8IWA4 741 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.86■□□□□ 0.13
CHD3-205ENST00000449744 PRCCQ92733 491 aaPredicted RBP15.86■□□□□ 0.13
CHD3-205ENST00000449744 SLC39A13Q96H72 371 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 PPP1R13BQ96KQ4 1090 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 PDCL3Q9H2J4 239 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 EVLQ9UI08 416 aaPredicted RBP15.86■□□□□ 0.13
CHD3-205ENST00000449744 PCDHGC3Q9UN70 934 aa15.86■□□□□ 0.13
CHD3-205ENST00000449744 ATXN2Q99700 1313 aaKnown RBP15.86■□□□□ 0.13
CHD3-205ENST00000449744 C4orf47A7E2U8 309 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 FOXN3O00409 490 aaPredicted RBP15.85■□□□□ 0.13
CHD3-205ENST00000449744 TRUB2O95900 331 aaKnown RBP15.85■□□□□ 0.13
CHD3-205ENST00000449744 ACADMP11310 421 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 POLR2EP19388 210 aaKnown RBP15.85■□□□□ 0.13
CHD3-205ENST00000449744 ITPKAP23677 461 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 PRKCHP24723 683 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 BPIFB4P59827 614 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 IRX4P78413 519 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 CDK17Q00537 523 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 RAPGEF1Q13905 1077 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 DCAF6Q58WW2 860 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 EFHC1Q5JVL4 640 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 MIIPQ5JXC2 388 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 MBLAC2Q68D91 279 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 NADSYN1Q6IA69 706 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 METTL3Q86U44 580 aaKnown RBP15.85■□□□□ 0.13
CHD3-205ENST00000449744 TMPRSS6Q8IU80 811 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 CARNMT1Q8N4J0 409 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 C1orf131Q8NDD1 294 aaKnown RBP15.85■□□□□ 0.13
CHD3-205ENST00000449744 CYB5D2Q8WUJ1 264 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 SIPA1Q96FS4 1042 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 CPXM1Q96SM3 734 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 LHX5Q9H2C1 402 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 SYNCQ9H7C4 482 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 TMEM9BQ9NQ34 198 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 SAMSN1Q9NSI8 373 aaKnown RBP15.85■□□□□ 0.13
CHD3-205ENST00000449744 TMEM74BQ9NUR3 256 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 TJP2Q9UDY2 1190 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 SLC12A6Q9UHW9 1150 aa15.85■□□□□ 0.13
CHD3-205ENST00000449744 AJAP1Q9UKB5 411 aaPredicted RBP15.85■□□□□ 0.13
CHD3-205ENST00000449744 GOLGA6L22H0YM25 854 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 CFIP05156 583 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 GLI1P08151 1106 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 HLA-EP13747 358 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 EEF1GP26641 437 aaKnown RBP15.84■□□□□ 0.13
CHD3-205ENST00000449744 CD6P30203 668 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 CD70P32970 193 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 HOXD12P35452 270 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 CDH18Q13634 790 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 DUOXA1Q1HG43 343 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 ZC3H12AQ5D1E8 599 aaKnown RBP15.84■□□□□ 0.13
CHD3-205ENST00000449744 TCP11X2Q5H9J9 407 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 MS4A13Q5J8X5 152 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 OR6B2Q6IFH4 312 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 RABEPKQ7Z6M1 372 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 KIAA0907Q7Z7F0 614 aaPredicted RBP15.84■□□□□ 0.13
CHD3-205ENST00000449744 ADIPOR2Q86V24 386 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 SLC47A2Q86VL8 602 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 CHSY1Q86X52 802 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 RGL4Q8IZJ4 473 aa15.84■□□□□ 0.13
CHD3-205ENST00000449744 DEFB106AQ8N104 65 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms