RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 COL13A1Q5TAT6 717 aaPredicted RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 SNX30Q5VWJ9 437 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 EMBQ6PCB8 327 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 NPNTQ6UXI9 565 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 HDXQ7Z353 690 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 MTERF4Q7Z6M4 381 aaKnown RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 TNS4Q8IZW8 715 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 ALLCQ8N6M5 410 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 PQLC3Q8N755 202 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 SLC35B2Q8TB61 432 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 TFB1MQ8WVM0 346 aaKnown RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 BTN2A3PQ96KV6 586 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 FCRL2Q96LA5 508 aaPredicted RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 DDX50Q9BQ39 737 aaKnown RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 TMEM121Q9BTD3 319 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 FAM129AQ9BZQ8 928 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 CCSER2Q9H7U1 834 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 TRPC7Q9HCX4 862 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 ARHGEF4Q9NR80 690 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 TMPRSS4Q9NRS4 437 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 MTMR10Q9NXD2 777 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 SAE1Q9UBE0 346 aaPredicted RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 NFU1Q9UMS0 254 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 IRAK3Q9Y616 596 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 RAD54BQ9Y620 910 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 PCNTO95613 3336 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 CENPFP49454 3210 aa10□□□□□ -0.81
RFC4-210ENST00000449502 ZSCAN5CA6NGD5 496 aaPredicted RBP10□□□□□ -0.81
RFC4-210ENST00000449502 HIDE1A8MVS5 230 aa10□□□□□ -0.81
RFC4-210ENST00000449502 KCNU1A8MYU2 1149 aa10□□□□□ -0.81
RFC4-210ENST00000449502 C1RP00736 705 aa10□□□□□ -0.81
RFC4-210ENST00000449502 MBL2P11226 248 aaPredicted RBP10□□□□□ -0.81
RFC4-210ENST00000449502 HMGA1P17096 107 aaKnown RBP10□□□□□ -0.81
RFC4-210ENST00000449502 ERCC2P18074 760 aa10□□□□□ -0.81
RFC4-210ENST00000449502 CDC25CP30307 473 aa10□□□□□ -0.81
RFC4-210ENST00000449502 PLTPP55058 493 aa10□□□□□ -0.81
RFC4-210ENST00000449502 ERVK-21P61565 698 aa10□□□□□ -0.81
RFC4-210ENST00000449502 PPP2R2DQ66LE6 453 aa10□□□□□ -0.81
RFC4-210ENST00000449502 DUPD1Q68J44 220 aa10□□□□□ -0.81
RFC4-210ENST00000449502 NCBP2-AS2Q69YL0 99 aa10□□□□□ -0.81
RFC4-210ENST00000449502 KLHDC10Q6PID8 442 aa10□□□□□ -0.81
RFC4-210ENST00000449502 CEP128Q6ZU80 1094 aa10□□□□□ -0.81
RFC4-210ENST00000449502 PCGF5Q86SE9 256 aa10□□□□□ -0.81
RFC4-210ENST00000449502 CHSY1Q86X52 802 aa10□□□□□ -0.81
RFC4-210ENST00000449502 GSPT2Q8IYD1 628 aaKnown RBP10□□□□□ -0.81
RFC4-210ENST00000449502 ZNF276Q8N554 614 aa10□□□□□ -0.81
RFC4-210ENST00000449502 LZTR1Q8N653 840 aa10□□□□□ -0.81
RFC4-210ENST00000449502 FAM71DQ8N9W8 422 aa10□□□□□ -0.81
RFC4-210ENST00000449502 CCNYQ8ND76 341 aa10□□□□□ -0.81
RFC4-210ENST00000449502 PPP2R3CQ969Q6 453 aa10□□□□□ -0.81
RFC4-210ENST00000449502 PLD4Q96BZ4 506 aa10□□□□□ -0.81
RFC4-210ENST00000449502 SNF8Q96H20 258 aa10□□□□□ -0.81
RFC4-210ENST00000449502 C1orf74Q96LT6 269 aa10□□□□□ -0.81
RFC4-210ENST00000449502 FMO2Q99518 471 aa10□□□□□ -0.81
RFC4-210ENST00000449502 BRD8Q9H0E9 1235 aa10□□□□□ -0.81
RFC4-210ENST00000449502 TSPYL1Q9H0U9 437 aa10□□□□□ -0.81
RFC4-210ENST00000449502 ATXN3LQ9H3M9 355 aa10□□□□□ -0.81
RFC4-210ENST00000449502 SLC28A3Q9HAS3 691 aa10□□□□□ -0.81
RFC4-210ENST00000449502 PCDH9Q9HC56 1237 aa10□□□□□ -0.81
RFC4-210ENST00000449502 ASAH2Q9NR71 780 aa10□□□□□ -0.81
RFC4-210ENST00000449502 WHRNQ9P202 907 aa10□□□□□ -0.81
RFC4-210ENST00000449502 ANAPC5Q9UJX4 755 aa10□□□□□ -0.81
RFC4-210ENST00000449502 SNX10Q9Y5X0 201 aa10□□□□□ -0.81
RFC4-210ENST00000449502 TRIP11Q15643 1979 aa10□□□□□ -0.81
RFC4-210ENST00000449502 CLUHO75153 1309 aa10□□□□□ -0.81
RFC4-210ENST00000449502 TET1Q8NFU7 2136 aa10□□□□□ -0.81
RFC4-210ENST00000449502 TRAV19A0A0A6YYK7 116 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 BCLAF3A2AJT9 711 aaKnown RBP9.99□□□□□ -0.81
RFC4-210ENST00000449502 E9PAM4 449 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 H3BNC9 293 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 GRM6O15303 877 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 NCAM2O15394 837 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 CCL16O15467 120 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 KCNN4O15554 427 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 COCHO43405 550 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 ATP8B1O43520 1251 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 NEBLO76041 1014 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 LRIG2O94898 1065 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 MYL4P12829 197 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 GABRR2P28476 465 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 GBE1Q04446 702 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 RING1Q06587 406 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 AP1B1Q10567 949 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 GPS1Q13098 491 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 GPS2Q13227 327 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 DPYSQ14117 519 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 PAFAH1B3Q15102 231 aaKnown RBP9.99□□□□□ -0.81
RFC4-210ENST00000449502 OASLQ15646 514 aaKnown RBP9.99□□□□□ -0.81
RFC4-210ENST00000449502 ARHGAP15Q53QZ3 475 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 SLC45A4Q5BKX6 768 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 IZUMO3Q5VZ72 239 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 HEATR6Q6AI08 1181 aaKnown RBP9.99□□□□□ -0.81
RFC4-210ENST00000449502 FAM109BQ6ICB4 259 aaPredicted RBP9.99□□□□□ -0.81
RFC4-210ENST00000449502 LILRA6Q6PI73 481 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 C4orf22Q6V702 233 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 DDX42Q86XP3 938 aaKnown RBP eCLIP9.99□□□□□ -0.81
RFC4-210ENST00000449502 LEMD2Q8NC56 503 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 ARNTL2Q8WYA1 636 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 SLC39A13Q96H72 371 aa9.99□□□□□ -0.81
RFC4-210ENST00000449502 CORO1BQ9BR76 489 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms