RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 ACSL4O60488 711 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 TSPAN3O60637 253 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 ENDOD1O94919 500 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 ADH1CP00326 375 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 APOEP02649 317 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 ADH5P11766 374 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 CCR1P32246 355 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 RDXP35241 583 aaKnown RBP11.03□□□□□ -0.64
SMPD4-211ENST00000449159 OPRD1P41143 372 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 SLC11A2P49281 568 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 CXCR3P49682 368 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 CLCN5P51795 746 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 HDAC4P56524 1084 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 MESP2Q0VG99 397 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 PPP2R5DQ14738 602 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 ANO4Q32M45 955 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 ADGRF1Q5T601 910 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 PIK3R6Q5UE93 754 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 DAB2IPQ5VWQ8 1189 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 CWF19L1Q69YN2 538 aaKnown RBP11.03□□□□□ -0.64
SMPD4-211ENST00000449159 C12orf40Q86WS4 652 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 FLCNQ8NFG4 579 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 FAM172AQ8WUF8 416 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 CENPIQ92674 756 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-211ENST00000449159 RNF34Q969K3 372 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 BTBD6Q96KE9 485 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 PRICKLE1Q96MT3 831 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-211ENST00000449159 CNPY3Q9BT09 278 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 NUP85Q9BW27 656 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 BBS2Q9BXC9 721 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 TKTL2Q9H0I9 626 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 TBC1D17Q9HA65 648 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMPD4-211ENST00000449159 ZNF510Q9Y2H8 683 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 SNX10Q9Y5X0 201 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 SCINQ9Y6U3 715 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 DNAH14Q0VDD8 3507 aa11.03□□□□□ -0.64
SMPD4-211ENST00000449159 TRIM24O15164 1050 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 HOXC11O43248 304 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 PAGE1O75459 146 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 LCA5LO95447 670 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 LATS1O95835 1130 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 F9P00740 461 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 H2AFZP0C0S5 128 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 TYRP14679 529 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 PSMA2P25787 234 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 CHKAP35790 457 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 SLC6A11P48066 632 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 STARD6P59095 220 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 PRKCQQ04759 706 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 GSE1Q14687 1217 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 PON2Q15165 354 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 MS4A13Q5J8X5 152 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 FYB2Q5VWT5 728 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 RAP1GAP2Q684P5 730 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 H2AFVQ71UI9 128 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 SND1Q7KZF4 910 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 RALGPS2Q86X27 583 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 TMTC1Q8IUR5 882 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 CCDC170Q8IYT3 715 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 CPXM2Q8N436 756 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 CCDC185Q8N715 623 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 NAT16Q8N8M0 369 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 CTNNBL1Q8WYA6 563 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 AZIN2Q96A70 460 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 BTN2A3PQ96KV6 586 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 BAG1Q99933 345 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 MAGEB5Q9BZ81 275 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 C8orf33Q9H7E9 229 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 FBRSL1Q9HCM7 1045 aaKnown RBP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 ARHGEF38Q9NXL2 777 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 MARK1Q9P0L2 795 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 CLEC4EQ9ULY5 219 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 NDRG2Q9UN36 371 aaKnown RBP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 REXO2Q9Y3B8 237 aaKnown RBP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 MTF2Q9Y483 593 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-211ENST00000449159 HS3ST4Q9Y661 456 aa11.02□□□□□ -0.65
SMPD4-211ENST00000449159 KANSL1LA0AUZ9 987 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 GOLGA6L6A8MZA4 724 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 NDUFA10O95299 355 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 PENKP01210 267 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-211ENST00000449159 TMEM253P0C7T8 217 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 SLC2A3P11169 496 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 GLULP15104 373 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 TCF4P15884 667 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 AOC1P19801 751 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 TACR2P21452 398 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 TARSP26639 723 aaKnown RBP11.01□□□□□ -0.65
SMPD4-211ENST00000449159 HOXD9P28356 352 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-211ENST00000449159 CYLC1P35663 651 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-211ENST00000449159 MAGEA1P43355 309 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 IRAK1P51617 712 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 MLLT6P55198 1093 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-211ENST00000449159 GSDMDP57764 484 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 RPS24P62847 133 aaKnown RBP11.01□□□□□ -0.65
SMPD4-211ENST00000449159 GAD2Q05329 585 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 KDSRQ06136 332 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 NR1H3Q13133 447 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 BRMS1LQ5PSV4 323 aa11.01□□□□□ -0.65
SMPD4-211ENST00000449159 ZNF852Q6ZMS4 543 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms