RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 RARBP10826 455 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 ESRRAP11474 423 aaPredicted RBP17.44■□□□□ 0.38
TOM1-210ENST00000449058 ADIGQ0VDE8 80 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 UBXN11Q5T124 520 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 DSTYKQ6XUX3 929 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 KYAT3Q6YP21 454 aaKnown RBP17.44■□□□□ 0.38
TOM1-210ENST00000449058 ARID3BQ8IVW6 561 aaPredicted RBP17.44■□□□□ 0.38
TOM1-210ENST00000449058 PDCD7Q8N8D1 485 aaKnown RBP17.44■□□□□ 0.38
TOM1-210ENST00000449058 B3GALNT2Q8NCR0 500 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 ACMSDQ8TDX5 336 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 RNF139Q8WU17 664 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 TMEM40Q8WWA1 233 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 ARNTL2Q8WYA1 636 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 NDRG1Q92597 394 aaKnown RBP17.44■□□□□ 0.38
TOM1-210ENST00000449058 P2RY11Q96G91 374 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 NPY6RQ99463 290 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 DUSP16Q9BY84 665 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 DCLRE1BQ9H816 532 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 BATF3Q9NR55 127 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 CCDC195A0A1B0GUA6 201 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 GSRP00390 522 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 WARSP23381 471 aaKnown RBP17.44■□□□□ 0.38
TOM1-210ENST00000449058 PITX1P78337 314 aaPredicted RBP17.44■□□□□ 0.38
TOM1-210ENST00000449058 HIC1Q14526 733 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 CRYMQ14894 314 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 OSTM1Q86WC4 334 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 CCNJLQ8IV13 435 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 PPP1R13LQ8WUF5 828 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 C20orf27Q9GZN8 174 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 WWP1Q9H0M0 922 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 GOLGA2P5Q9HBQ8 144 aa17.44■□□□□ 0.38
TOM1-210ENST00000449058 PIN4Q9Y237 131 aaKnown RBP17.44■□□□□ 0.38
TOM1-210ENST00000449058 H3BRJ5 948 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 HUS1O60921 280 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 STK10O94804 968 aaKnown RBP17.43■□□□□ 0.38
TOM1-210ENST00000449058 NOS2P35228 1153 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 ADAM17P78536 824 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 CRADDP78560 199 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 NAB1Q13506 487 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 SNX17Q15036 470 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 DCAF6Q58WW2 860 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 C9orf131Q5VYM1 1079 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 PACS1Q6VY07 963 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 CRLF3Q8IUI8 442 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.43■□□□□ 0.386e-7■■■■■ 87.8
TOM1-210ENST00000449058 FAM149B1Q96BN6 582 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 ARMCX1Q9P291 453 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 HBS1LQ9Y450 684 aaKnown RBP17.43■□□□□ 0.38
TOM1-210ENST00000449058 F5H423 210 aaPredicted RBP17.43■□□□□ 0.38
TOM1-210ENST00000449058 TOP3BO95985 862 aaKnown RBP17.43■□□□□ 0.38
TOM1-210ENST00000449058 ALDOAP04075 364 aaKnown RBP17.43■□□□□ 0.38
TOM1-210ENST00000449058 PGAM1P18669 254 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 LILRA4P59901 499 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 WASHC5Q12768 1159 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 PAFAH1B3Q15102 231 aaKnown RBP17.43■□□□□ 0.38
TOM1-210ENST00000449058 KHDC1Q4VXA5 237 aaKnown RBP17.43■□□□□ 0.38
TOM1-210ENST00000449058 TOP6BLQ8N6T0 577 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 NPLOC4Q8TAT6 608 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 KCTD13Q8WZ19 329 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 TMPRSS4Q9NRS4 437 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 EMCNQ9ULC0 261 aa17.43■□□□□ 0.38
TOM1-210ENST00000449058 CCL15-CCL14A0A0B4J2E2 113 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 ATP5BP06576 529 aaKnown RBP17.42■□□□□ 0.38
TOM1-210ENST00000449058 MGAT1P26572 445 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 AP1B1Q10567 949 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 STX3Q13277 289 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 DPYSQ14117 519 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 PDK1Q15118 436 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 TAF11Q15544 211 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 CCL15Q16663 113 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 CASC4Q6P4E1 433 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 PAQR9Q6ZVX9 377 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 TREML1Q86YW5 311 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 DNAJB3Q8WWF6 145 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 BRI3BPQ8WY22 251 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 SLC2A13Q96QE2 648 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 NAT9Q9BTE0 207 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 THAP1Q9NVV9 213 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 SLC17A6Q9P2U8 582 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 H0Y3Z8 333 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 DYNC1LI2O43237 492 aaPredicted RBP17.42■□□□□ 0.38
TOM1-210ENST00000449058 BEST1O76090 585 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 AQP5P55064 265 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 NAA25Q14CX7 972 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 CMPK2Q5EBM0 449 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 ANKRD23Q86SG2 305 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 CDKL2Q92772 493 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 MCUR1Q96AQ8 359 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 XPNPEP3Q9NQH7 507 aa17.42■□□□□ 0.38
TOM1-210ENST00000449058 TRIP12Q14669 1992 aaPredicted RBP17.41■□□□□ 0.38
TOM1-210ENST00000449058 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.41■□□□□ 0.38
TOM1-210ENST00000449058 UNCXA6NJT0 531 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 NPR3P17342 541 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 PSMB4P28070 264 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 PTDSS1P48651 473 aaKnown RBP17.41■□□□□ 0.38
TOM1-210ENST00000449058 GTF2A2P52657 109 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 SESN2P58004 480 aaPredicted RBP17.41■□□□□ 0.38
TOM1-210ENST00000449058 FASTKD1Q53R41 847 aaKnown RBP17.41■□□□□ 0.38
TOM1-210ENST00000449058 MBLAC2Q68D91 279 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms