RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 CHST9Q7L1S5 443 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 ADAT2Q7Z6V5 191 aaKnown RBP25.45■■□□□ 1.66
PMS1-214ENST00000446877 FMNL3Q8IVF7 1028 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 IGSF8Q969P0 613 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 BIRC7Q96CA5 298 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 HBS1LQ9Y450 684 aaKnown RBP25.45■■□□□ 1.66
PMS1-214ENST00000446877 SLCO1B1Q9Y6L6 691 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 KCNK3O14649 394 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 F13A1P00488 732 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 ATP5BP06576 529 aaKnown RBP25.44■■□□□ 1.66
PMS1-214ENST00000446877 CD27P26842 260 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 CCT8P50990 548 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 BCAT1P54687 386 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 NFIL3Q16649 462 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 TTC31Q49AM3 519 aaPredicted RBP25.44■■□□□ 1.66
PMS1-214ENST00000446877 PM20D1Q6GTS8 502 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 MARCH9Q86YJ5 346 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 ZNF366Q8N895 744 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 PDCD7Q8N8D1 485 aaKnown RBP25.44■■□□□ 1.66
PMS1-214ENST00000446877 SLC4A11Q8NBS3 891 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 IPO9Q96P70 1041 aaKnown RBP25.44■■□□□ 1.66
PMS1-214ENST00000446877 ULBP1Q9BZM6 244 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 LRRC4Q9HBW1 653 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 ABCB8Q9NUT2 735 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 RCOR1Q9UKL0 485 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 KNL1Q8NG31 2342 aa25.44■■□□□ 1.66
PMS1-214ENST00000446877 RAD23BP54727 409 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 RPS14P62263 151 aaKnown RBP25.43■■□□□ 1.66
PMS1-214ENST00000446877 ADAM9Q13443 819 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 ADGRF1Q5T601 910 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 AHI1Q8N157 1196 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 GOLGA1Q92805 767 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 SGK2Q9HBY8 427 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 PRSS16Q9NQE7 514 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 SUN2Q9UH99 717 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 GGA2Q9UJY4 613 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 MAPK8IP1Q9UQF2 711 aa25.43■■□□□ 1.66
PMS1-214ENST00000446877 FAM149AA5PLN7 773 aa25.42■■□□□ 1.66
PMS1-214ENST00000446877 PCDHGA12O60330 932 aa25.42■■□□□ 1.66
PMS1-214ENST00000446877 DFNA5O60443 496 aa25.42■■□□□ 1.66
PMS1-214ENST00000446877 HSP90AA1P07900 732 aaKnown RBP25.42■■□□□ 1.66
PMS1-214ENST00000446877 ADIPOR2Q86V24 386 aa25.42■■□□□ 1.66
PMS1-214ENST00000446877 GANCQ8TET4 914 aa25.42■■□□□ 1.66
PMS1-214ENST00000446877 NDRG1Q92597 394 aaKnown RBP25.42■■□□□ 1.66
PMS1-214ENST00000446877 NCKAP1Q9Y2A7 1128 aa25.42■■□□□ 1.66
PMS1-214ENST00000446877 URB1O60287 2271 aaKnown RBP25.42■■□□□ 1.66
PMS1-214ENST00000446877 A0A1B0GVL5 298 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 H0Y8X5 98 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 DLDP09622 509 aaKnown RBP25.41■■□□□ 1.66
PMS1-214ENST00000446877 C7P10643 843 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 PABPC1P11940 636 aaKnown RBP25.41■■□□□ 1.66
PMS1-214ENST00000446877 POLR2EP19388 210 aaKnown RBP25.41■■□□□ 1.66
PMS1-214ENST00000446877 C21orf59P57076 290 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 SMAD1Q15797 465 aaKnown RBP25.41■■□□□ 1.66
PMS1-214ENST00000446877 GOLGA7BQ2TAP0 167 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 MBLAC2Q68D91 279 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 FBXL13Q8NEE6 735 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 SEMA4DQ92854 862 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 RAB20Q9NX57 234 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 HESX1Q9UBX0 185 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 FTSJ1Q9UET6 329 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 SFMBT1Q9UHJ3 866 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 STOML2Q9UJZ1 356 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 PLXNB3Q9ULL4 1909 aa25.41■■□□□ 1.66
PMS1-214ENST00000446877 XPO1O14980 1071 aaKnown RBP25.4■■□□□ 1.66
PMS1-214ENST00000446877 STX10O60499 249 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 LATS1O95835 1130 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 PFKFB1P16118 471 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 CMA1P23946 247 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 MXI1P50539 228 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 DNM1Q05193 864 aaKnown RBP25.4■■□□□ 1.66
PMS1-214ENST00000446877 PTPRNQ16849 979 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 BSPRYQ5W0U4 402 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 ZNF776Q68DI1 518 aaPredicted RBP25.4■■□□□ 1.66
PMS1-214ENST00000446877 LAYNQ6UX15 382 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 SCUBE3Q8IX30 993 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.4■■□□□ 1.66
PMS1-214ENST00000446877 EDEM1Q92611 657 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 SKA1Q96BD8 255 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 ACE2Q9BYF1 805 aaPredicted RBP25.4■■□□□ 1.66
PMS1-214ENST00000446877 CABIN1Q9Y6J0 2220 aa25.4■■□□□ 1.66
PMS1-214ENST00000446877 CTSKP43235 329 aa25.39■■□□□ 1.66
PMS1-214ENST00000446877 SFSWAPQ12872 951 aaKnown RBP25.39■■□□□ 1.66
PMS1-214ENST00000446877 CAMK2BQ13554 666 aa25.39■■□□□ 1.66
PMS1-214ENST00000446877 DHRS13Q6UX07 377 aa25.39■■□□□ 1.66
PMS1-214ENST00000446877 KIAA0907Q7Z7F0 614 aaPredicted RBP25.39■■□□□ 1.66
PMS1-214ENST00000446877 SIX6OS1Q8N1H7 587 aa25.39■■□□□ 1.66
PMS1-214ENST00000446877 ABCC13Q9NSE7 274 aa25.39■■□□□ 1.66
PMS1-214ENST00000446877 GCN1Q92616 2671 aaKnown RBP25.38■■□□□ 1.65
PMS1-214ENST00000446877 A0A087WV48 116 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 FAM47DPA6NHR8 397 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 E9PAM4 449 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 RHOBTB3O94955 611 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 RACK1P63244 317 aaKnown RBP25.38■■□□□ 1.65
PMS1-214ENST00000446877 IL9RQ01113 521 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 ADIGQ0VDE8 80 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 SGO2Q562F6 1265 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 KIAA0895LQ68EN5 471 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 GUF1Q8N442 669 aaKnown RBP25.38■■□□□ 1.65
PMS1-214ENST00000446877 ZNF557Q8N988 423 aaPredicted RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms