RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PTP4A2Q12974 167 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 ASIC2Q16515 512 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 PREPLQ4J6C6 727 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-204ENST00000446876 RAP1GAP2Q684P5 730 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 TMEM92Q6UXU6 159 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 CHSY1Q86X52 802 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 CFAP52Q8N1V2 620 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 EMC1Q8N766 993 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 CCDC26Q8TAB7 109 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 RNF34Q969K3 372 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 AZIN2Q96A70 460 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 TBCBQ99426 244 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 NPY6RQ99463 290 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 FAM126AQ9BYI3 521 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-204ENST00000446876 PIGVQ9NUD9 493 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 MYO6Q9UM54 1294 aa15.39■□□□□ 0.05
HDAC4-204ENST00000446876 GFRA3O60609 400 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 GBP1P32455 592 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 SCNN1AP37088 669 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 GGCXP38435 758 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 NSFP46459 744 aaKnown RBP15.38■□□□□ 0.05
HDAC4-204ENST00000446876 ATXN1P54253 815 aaKnown RBP15.38■□□□□ 0.05
HDAC4-204ENST00000446876 NRLP54845 237 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 ZNF445P59923 1031 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 MS4A13Q5J8X5 152 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 ANKS1BQ7Z6G8 1248 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 LONP2Q86WA8 852 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 LGI2Q8N0V4 545 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 TSTD1Q8NFU3 115 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 SORCS1Q8WY21 1168 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 CFAP57Q96MR6 1250 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 SYT11Q9BT88 431 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 XPO4Q9C0E2 1151 aaKnown RBP15.38■□□□□ 0.05
HDAC4-204ENST00000446876 ANLNQ9NQW6 1124 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.38■□□□□ 0.053e-12■■■■■ 46.3
HDAC4-204ENST00000446876 TAS2R14Q9NYV8 317 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 TMEM59LQ9UK28 342 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 SLC27A6Q9Y2P4 619 aa15.38■□□□□ 0.05
HDAC4-204ENST00000446876 MUC22E2RYF6 1773 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-204ENST00000446876 KCNU1A8MYU2 1149 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 HRO43593 1189 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 APBB3O95704 486 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 SKILP12757 684 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 TACR2P21452 398 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 HLA-FP30511 346 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 CCR1P32246 355 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 CRY1Q16526 586 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 LPAL2Q16609 132 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 RAB6CQ53S08 254 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 SFMBT2Q5VUG0 894 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 TMEM215Q68D42 235 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 ANO7Q6IWH7 933 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 NUDT18Q6ZVK8 323 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 MON1BQ7L1V2 547 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 WDR5BQ86VZ2 330 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 CIR1Q86X95 450 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-204ENST00000446876 DNAAF5Q86Y56 855 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 ATP6V0D2Q8N8Y2 350 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 HJURPQ8NCD3 748 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-204ENST00000446876 JOSD2Q8TAC2 188 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 BTN2A3PQ96KV6 586 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 DDX50Q9BQ39 737 aaKnown RBP15.37■□□□□ 0.05
HDAC4-204ENST00000446876 TPSD1Q9BZJ3 242 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 RAB6CQ9H0N0 254 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 HAUS4Q9H6D7 363 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 TMPRSS4Q9NRS4 437 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 ABCB8Q9NUT2 735 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 CACNA2D2Q9NY47 1150 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 ADAM22Q9P0K1 906 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 STAP1Q9ULZ2 295 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 STARD13Q9Y3M8 1113 aa15.37■□□□□ 0.05
HDAC4-204ENST00000446876 TMCO5BA8MYB1 307 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 WASH3PC4AMC7 463 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 I6L893 689 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-204ENST00000446876 ADCY5O95622 1261 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 LMNAP02545 664 aaKnown RBP15.36■□□□□ 0.05
HDAC4-204ENST00000446876 CCDC172P0C7W6 258 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 ABCB4P21439 1286 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 TNFAIP3P21580 790 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 HOXA6P31267 233 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-204ENST00000446876 CD70P32970 193 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 IRAK1P51617 712 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 DEUP1Q05D60 604 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 EOGTQ5NDL2 527 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 RNF43Q68DV7 783 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 ZNF571Q7Z3V5 609 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-204ENST00000446876 PHF13Q86YI8 300 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-204ENST00000446876 MFN1Q8IWA4 741 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 CHPFQ8IZ52 775 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 CARNMT1Q8N4J0 409 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 CAMKK1Q8N5S9 505 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 SUMF1Q8NBK3 374 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 CPLX3Q8WVH0 158 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 NT5C3BQ969T7 300 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 PRMT1Q99873 361 aaKnown RBP15.36■□□□□ 0.05
HDAC4-204ENST00000446876 SLC2A11Q9BYW1 496 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 CIPCQ9C0C6 399 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 AIPL1Q9NZN9 384 aa15.36■□□□□ 0.05
HDAC4-204ENST00000446876 SNX10Q9Y5X0 201 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms