RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 HS3ST4Q9Y661 456 aa18.03■□□□□ 0.48
SGCE-206ENST00000445866 PRUNE2Q8WUY3 3088 aa18.02■□□□□ 0.48
SGCE-206ENST00000445866 ZRANB2O95218 330 aaKnown RBP eCLIP18.02■□□□□ 0.47
SGCE-206ENST00000445866 FCARP24071 287 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 CTNNA2P26232 953 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 L1CAMP32004 1257 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 CTNNA1P35221 906 aaKnown RBP18.02■□□□□ 0.47
SGCE-206ENST00000445866 PEX5P50542 639 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 ETF1P62495 437 aaKnown RBP18.02■□□□□ 0.47
SGCE-206ENST00000445866 AUHQ13825 339 aaKnown RBP18.02■□□□□ 0.47
SGCE-206ENST00000445866 KRT81Q14533 505 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 PPP6R3Q5H9R7 873 aaPredicted RBP18.02■□□□□ 0.47
SGCE-206ENST00000445866 MS4A13Q5J8X5 152 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 ACBD5Q5T8D3 534 aaPredicted RBP18.02■□□□□ 0.47
SGCE-206ENST00000445866 PIK3R6Q5UE93 754 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 RAP1GAP2Q684P5 730 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 MFSD6LQ8IWD5 586 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 FGF14Q92915 247 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 ELSPBP1Q96BH3 223 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 PLA2G2FQ9BZM2 168 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 TBC1D14Q9P2M4 693 aa18.02■□□□□ 0.47
SGCE-206ENST00000445866 FAM72CH0Y354 149 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 TRDMT1O14717 391 aaKnown RBP18.01■□□□□ 0.47
SGCE-206ENST00000445866 SLC9A3R1O14745 358 aaPredicted RBP18.01■□□□□ 0.47
SGCE-206ENST00000445866 TSPAN3O60637 253 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 LATS1O95835 1130 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 IL9P15248 144 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 GGCXP38435 758 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 MARCKSL1P49006 195 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 CDH6P55285 790 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 RWDD2BP57060 319 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 USP4Q13107 963 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 FAM72AQ5TYM5 149 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 NADSYN1Q6IA69 706 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 FAM72DQ6L9T8 149 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 RFWD3Q6PCD5 774 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 LRRC31Q6UY01 552 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 C14orf80Q86SX3 495 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 CHSY1Q86X52 802 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 FAM72BQ86X60 149 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 MAP7D3Q8IWC1 876 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 YAF2Q8IY57 180 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 RCOR2Q8IZ40 523 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 RAPGEF5Q92565 580 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 C16orf45Q96MC5 204 aaPredicted RBP18.01■□□□□ 0.47
SGCE-206ENST00000445866 RPP25Q9BUL9 199 aaKnown RBP18.01■□□□□ 0.47
SGCE-206ENST00000445866 TLR10Q9BXR5 811 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 KLHL11Q9NVR0 708 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 DUS2Q9NX74 493 aaKnown RBP18.01■□□□□ 0.47
SGCE-206ENST00000445866 THEGQ9P2T0 379 aa18.01■□□□□ 0.47
SGCE-206ENST00000445866 ANHXE9PGG2 379 aa18■□□□□ 0.47
SGCE-206ENST00000445866 PI4K2BG5E9Z4 385 aa18■□□□□ 0.47
SGCE-206ENST00000445866 DDX3YO15523 660 aaKnown RBP18■□□□□ 0.47
SGCE-206ENST00000445866 CREB3O43889 395 aa18■□□□□ 0.47
SGCE-206ENST00000445866 ECI2O75521 394 aa18■□□□□ 0.47
SGCE-206ENST00000445866 TACR2P21452 398 aa18■□□□□ 0.47
SGCE-206ENST00000445866 CHKAP35790 457 aa18■□□□□ 0.47
SGCE-206ENST00000445866 VITQ6UXI7 678 aa18■□□□□ 0.47
SGCE-206ENST00000445866 SYT10Q6XYQ8 523 aa18■□□□□ 0.47
SGCE-206ENST00000445866 KATNAL2Q8IYT4 538 aa18■□□□□ 0.47
SGCE-206ENST00000445866 ADGRG2Q8IZP9 1017 aa18■□□□□ 0.47
SGCE-206ENST00000445866 RNF25Q96BH1 459 aaPredicted RBP18■□□□□ 0.47
SGCE-206ENST00000445866 KCTD15Q96SI1 283 aaPredicted RBP18■□□□□ 0.47
SGCE-206ENST00000445866 DNAI1Q9UI46 699 aa18■□□□□ 0.47
SGCE-206ENST00000445866 STOML2Q9UJZ1 356 aa18■□□□□ 0.47
SGCE-206ENST00000445866 WNT6Q9Y6F9 365 aa18■□□□□ 0.47
SGCE-206ENST00000445866 NUMBLQ9Y6R0 609 aa18■□□□□ 0.47
SGCE-206ENST00000445866 LRRD1A4D1F6 860 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 KRT1P04264 644 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 PSMC3P17980 439 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 KDELR1P24390 212 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 HTR4Q13639 388 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 PDK2Q15119 407 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 DPYSL2Q16555 572 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 FAM133BQ5BKY9 247 aaKnown RBP17.99■□□□□ 0.47
SGCE-206ENST00000445866 RWDD4Q6NW29 188 aaKnown RBP17.99■□□□□ 0.47
SGCE-206ENST00000445866 FBXL22Q6P050 247 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 NYAP1Q6ZVC0 841 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 ZDHHC14Q8IZN3 488 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 LGI2Q8N0V4 545 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 KIAA1958Q8N8K9 716 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 RSAD2Q8WXG1 361 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 ALG3Q92685 438 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 TMA16Q96EY4 203 aaKnown RBP17.99■□□□□ 0.47
SGCE-206ENST00000445866 PRMT1Q99873 361 aaKnown RBP17.99■□□□□ 0.47
SGCE-206ENST00000445866 CALN1Q9BXU9 219 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 PCDH18Q9HCL0 1135 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 STIM2Q9P246 746 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 VANGL2Q9ULK5 521 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 CTAGE9A4FU28 777 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 ESPNB1AK53 854 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 F5H5T6 163 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 DAPK3O43293 454 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 CD48P09326 243 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 CASQ1P31415 396 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 SLC6A4P31645 630 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 IFNAR2P48551 515 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 GRM2Q14416 872 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 EXD1Q8NHP7 514 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 OSCP1Q8WVF1 389 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms