RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 NUP93Q8N1F7 819 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 APOBEC3GQ9HC16 384 aaKnown RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 RIC8BQ9NVN3 520 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 STX18Q9P2W9 335 aaKnown RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 FETUBQ9UGM5 382 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 ADAM28Q9UKQ2 775 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 CICQ96RK0 1608 aaPredicted RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 SUPT3HB4E1H0 165 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 DNAJC6O75061 913 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 SUPT3HO75486 399 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 SERPINA6P08185 405 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 AXLP30530 894 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 RIN3Q8TB24 985 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 SPOCK2Q92563 424 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 SYT15Q9BQS2 421 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 FICDQ9BVA6 458 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 UBP1Q9NZI7 540 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 MORF4L1Q9UBU8 362 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 CORO1CQ9ULV4 474 aaPredicted RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 KLRG2A4D1S0 409 aaPredicted RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 DHX15O43143 795 aaKnown RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 B3GAT3O94766 335 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 ERBB2P04626 1255 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 TFE3P19532 575 aaPredicted RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 HMOX2P30519 316 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 ZC3H12AQ5D1E8 599 aaKnown RBP17.05■□□□□ 0.32
TCOF1-206ENST00000445265 ZBTB41Q5SVQ8 909 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 CDC26Q8NHZ8 85 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 CXorf38Q8TB03 319 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 CAAP1Q9H8G2 361 aa17.05■□□□□ 0.32
TCOF1-206ENST00000445265 PDE5AO76074 875 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 CDC25CP30307 473 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 CD151P48509 253 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 TCHHL1Q5QJ38 904 aaPredicted RBP17.04■□□□□ 0.32
TCOF1-206ENST00000445265 XYLT1Q86Y38 959 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 B4GALT5O43286 388 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 STRNO43815 780 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 CERS2Q96G23 380 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 POPDC2Q9HBU9 364 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 PCDH18Q9HCL0 1135 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 AVILO75366 819 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 THP07101 528 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 WLSQ5T9L3 541 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 PSTKQ8IV42 348 aaKnown RBP17.04■□□□□ 0.32
TCOF1-206ENST00000445265 WNT8BQ93098 351 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 ARHGEF3Q9NR81 526 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 NDFIP2Q9NV92 336 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 ARL8BQ9NVJ2 186 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 DDX43Q9NXZ2 648 aaKnown RBP17.04■□□□□ 0.32
TCOF1-206ENST00000445265 MAFBQ9Y5Q3 323 aaPredicted RBP17.04■□□□□ 0.32
TCOF1-206ENST00000445265 LIN7AO14910 233 aaPredicted RBP17.04■□□□□ 0.32
TCOF1-206ENST00000445265 ERVK-10P10266 1014 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 CCDC130P13994 396 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 RAG1P15918 1043 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 CRABP2P29373 138 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 RANBP1P43487 201 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 CYP4X1Q8N118 509 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 SLC4A11Q8NBS3 891 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 MTMR14Q8NCE2 650 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 SPDYE1Q8NFV5 336 aaPredicted RBP17.04■□□□□ 0.32
TCOF1-206ENST00000445265 PRKD2Q9BZL6 878 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
TCOF1-206ENST00000445265 GSC2O15499 205 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 MGEA5O60502 916 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 NFKBIAP25963 317 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 PSMB4P28070 264 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 GABRB2P47870 512 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 SLC22A9Q8IVM8 553 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 RFWD2Q8NHY2 731 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 IL1RL2Q9HB29 575 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 GPAMQ9HCL2 828 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 VPS9D1Q9Y2B5 631 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 PLLPQ9Y342 182 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 C16orf96A6NNT2 1141 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 A8MUI8 341 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 UBDO15205 165 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 TPH1P17752 444 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 ME2P23368 584 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 AKAP5P24588 427 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 FNBP1LQ5T0N5 605 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 SNX32Q86XE0 403 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 ANKRD52Q8NB46 1076 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 CYGBQ8WWM9 190 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 CCDC90BQ9GZT6 254 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 CYP4F12Q9HCS2 524 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 SNX13Q9Y5W8 968 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 PSMA4P25789 261 aaKnown RBP17.03■□□□□ 0.32
TCOF1-206ENST00000445265 ICAM3P32942 547 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 CSHL1Q14406 222 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 GSTA3Q16772 222 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 C6orf10Q5SRN2 563 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 GLB1LQ6UWU2 654 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 ATP6V0D2Q8N8Y2 350 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 TRIM54Q9BYV2 358 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 RABGEF1Q9UJ41 708 aa17.03■□□□□ 0.32
TCOF1-206ENST00000445265 XPO1O14980 1071 aaKnown RBP17.03■□□□□ 0.32
TCOF1-206ENST00000445265 ATP4AP20648 1035 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms