RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ACKR2O00590 384 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 FOXP2O15409 715 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 CLASP2O75122 1294 aaKnown RBP8.2□□□□□ -1.1
RIF1-205ENST00000444746 PDK2Q15119 407 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 UGP2Q16851 508 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 HSDL1Q3SXM5 330 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 NT5DC1Q5TFE4 455 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 TRMT11Q7Z4G4 463 aaKnown RBP8.2□□□□□ -1.1
RIF1-205ENST00000444746 NAT16Q8N8M0 369 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 DNERQ8NFT8 737 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 B3GALT6Q96L58 329 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 DPEP3Q9H4B8 488 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 PCDHB5Q9Y5E4 795 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 SOAT2O75908 522 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 KLHL2O95198 593 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 CST3P01034 146 aaPredicted RBP8.2□□□□□ -1.1
RIF1-205ENST00000444746 GOT1P17174 413 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 KDELR1P24390 212 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 CHI3L1P36222 383 aaPredicted RBP8.2□□□□□ -1.1
RIF1-205ENST00000444746 SNRPFP62306 86 aaKnown RBP8.2□□□□□ -1.1
RIF1-205ENST00000444746 YWHAZP63104 245 aaKnown RBP8.2□□□□□ -1.1
RIF1-205ENST00000444746 SEMA3FQ13275 785 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 DENND1CQ8IV53 801 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 CYP2S1Q96SQ9 504 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 SNRNP25Q9BV90 132 aaKnown RBP8.2□□□□□ -1.1
RIF1-205ENST00000444746 TRIM62Q9BVG3 475 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 TLR8Q9NR97 1041 aaKnown RBP8.2□□□□□ -1.1
RIF1-205ENST00000444746 REREQ9P2R6 1566 aa8.2□□□□□ -1.1
RIF1-205ENST00000444746 MSX2P35548 267 aaPredicted RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 DNAL1Q4LDG9 190 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ARHGAP15Q53QZ3 475 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ALFQ53S48 1182 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 WDR93Q6P2C0 686 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 SAPCD2Q86UD0 394 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 PIK3R5Q8WYR1 880 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 GDF3Q9NR23 364 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ITGA11Q9UKX5 1188 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 GTF2A1LQ9UNN4 478 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 MAPTP10636 758 aaKnown RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 ZNF280DQ6N043 979 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ANKS3Q6ZW76 656 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 GPC2Q8N158 579 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 MYLPFQ96A32 169 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 SRPK1Q96SB4 655 aaKnown RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 TBL1YQ9BQ87 522 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ZNF112Q9UJU3 913 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 C9IYK1 514 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 TP73O15350 636 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 VPS26AO75436 327 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 PTPN1P18031 435 aaKnown RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 NELFEP18615 380 aaKnown RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 GJA9P57773 515 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 SEMG2Q02383 582 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 POLD3Q15054 466 aaPredicted RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 C4orf32Q8N8J7 132 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 BAP1Q92560 729 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 NMD3Q96D46 503 aaKnown RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 PORCNQ9H237 461 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 MID1IP1Q9NPA3 183 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ETNK2Q9NVF9 386 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.19□□□□□ -1.14e-6■■□□□ 13.4
RIF1-205ENST00000444746 C6orf203Q9P0P8 240 aaPredicted RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 TEKT2Q9UIF3 430 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 UBIAD1Q9Y5Z9 338 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 RASSF10A6NK89 507 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 HNF4AP41235 474 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 FIGNQ5HY92 759 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 TJAP1Q5JTD0 557 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 MARC1Q5VT66 337 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 AGAP9Q5VTM2 703 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 CALML6Q8TD86 181 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 SLC16A10Q8TF71 515 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 KDM4CQ9H3R0 1056 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ERBB2P04626 1255 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 NFKB1P19838 968 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 RPL22P35268 128 aaKnown RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 CD86P42081 329 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 RGS4P49798 205 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 OTUD3Q5T2D3 398 aaPredicted RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 SCUBE1Q8IWY4 988 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 TRIM48Q8IWZ4 208 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ETNPPLQ8TBG4 499 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 HNRNPLLQ8WVV9 542 aaKnown RBP8.19□□□□□ -1.1
RIF1-205ENST00000444746 THAP11Q96EK4 314 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ZNF333Q96JL9 665 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 RGS18Q9NS28 235 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 SALL4Q9UJQ4 1053 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 A0A096LPK6 155 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 GNG14A0A1W2PPG7 69 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 GZMAP12544 262 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 LHX1P48742 406 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 TEDDM1Q5T9Z0 273 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 ERAP2Q6P179 960 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 IZUMO2Q6UXV1 221 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 GPR142Q7Z601 462 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 VSIG10LQ86VR7 867 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 VMP1Q96GC9 406 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 KCNK16Q96T55 309 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 PKD2L2Q9NZM6 624 aa8.19□□□□□ -1.1
RIF1-205ENST00000444746 AAR2Q9Y312 384 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms