RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 FAM149B1Q96BN6 582 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 LMLNQ96KR4 655 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 MKRN2Q9H000 416 aaKnown RBP11.31□□□□□ -0.6
SF3A1-203ENST00000444440 FSCN3Q9NQT6 498 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 VPS45Q9NRW7 570 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 ABCB8Q9NUT2 735 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 ELOVL2Q9NXB9 296 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 PCDHGC3Q9UN70 934 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 CYP8B1Q9UNU6 501 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 IRAK2O43187 625 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 MED7O43513 233 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 TBL1XO60907 577 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 MOCS2O96007 188 aaPredicted RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 ERBB2P04626 1255 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 ITPKAP23677 461 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 NUMBP49757 651 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 KLK7P49862 253 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 LIMK1P53667 647 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 RPS24P62847 133 aaKnown RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 IRX4P78413 519 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 RING1Q06587 406 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 KCNJ12Q14500 433 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 PTPRNQ16849 979 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 PTPN20Q4JDL3 420 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 ZC3H12AQ5D1E8 599 aaKnown RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 TCP11X2Q5H9J9 407 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 CT47A1Q5JQC4 288 aaPredicted RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 STPG1Q5TH74 334 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 OTUD1Q5VV17 481 aaPredicted RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 MMS22LQ6ZRQ5 1243 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 C11orf57Q6ZUT1 292 aaPredicted RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 FAM183BPQ6ZVS7 135 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 CYP2U1Q7Z449 544 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 CACUL1Q86Y37 369 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 FAM71AQ8IYT1 594 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 CFAP52Q8N1V2 620 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 C12orf50Q8NA57 414 aaPredicted RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 PIGKQ92643 395 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 TMA16Q96EY4 203 aaKnown RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 MYO19Q96H55 970 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 SPACA7Q96KW9 195 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 NAA15Q9BXJ9 866 aaKnown RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 SLC2A11Q9BYW1 496 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 CIPCQ9C0C6 399 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 TAB2Q9NYJ8 693 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 INTS6Q9UL03 887 aaKnown RBP11.3□□□□□ -0.6
SF3A1-203ENST00000444440 TLR6Q9Y2C9 796 aa11.3□□□□□ -0.6
SF3A1-203ENST00000444440 FRYQ5TBA9 3013 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 CDX4O14627 284 aaPredicted RBP11.29□□□□□ -0.6
SF3A1-203ENST00000444440 EPHB6O15197 1021 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 GRAP2O75791 330 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 MBD3O95983 291 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 TFE3P19532 575 aaPredicted RBP11.29□□□□□ -0.6
SF3A1-203ENST00000444440 ACADSBP45954 432 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 FOXK2Q01167 660 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 RPL6Q02878 288 aaKnown RBP11.29□□□□□ -0.6
SF3A1-203ENST00000444440 DRAP1Q14919 205 aaPredicted RBP11.29□□□□□ -0.6
SF3A1-203ENST00000444440 FSCBQ5H9T9 825 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 KLHDC7AQ5VTJ3 777 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 CDKAL1Q5VV42 579 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 PEAR1Q5VY43 1037 aaPredicted RBP11.29□□□□□ -0.6
SF3A1-203ENST00000444440 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 KIAA1324Q6UXG2 1013 aaKnown RBP11.29□□□□□ -0.6
SF3A1-203ENST00000444440 CHST9Q7L1S5 443 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 BEND5Q7L4P6 421 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 C11orf74Q86VG3 221 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 FAM114A1Q8IWE2 563 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 DEFB106AQ8N104 65 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
SF3A1-203ENST00000444440 SERPINB11Q96P15 392 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 SLC2A13Q96QE2 648 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 EDEM2Q9BV94 578 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 LSM14BQ9BX40 385 aaKnown RBP11.29□□□□□ -0.6
SF3A1-203ENST00000444440 TMEM245Q9H330 911 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 MTG2Q9H4K7 406 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 POPDC2Q9HBU9 364 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 STIM2Q9P246 746 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 USP36Q9P275 1121 aaKnown RBP11.29□□□□□ -0.6
SF3A1-203ENST00000444440 GGA2Q9UJY4 613 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 PILRBQ9UKJ0 227 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 NFE2L3Q9Y4A8 694 aa11.29□□□□□ -0.6
SF3A1-203ENST00000444440 MAP3K13O43283 966 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 TRUB2O95900 331 aaKnown RBP11.28□□□□□ -0.6
SF3A1-203ENST00000444440 PABPC1P11940 636 aaKnown RBP11.28□□□□□ -0.6
SF3A1-203ENST00000444440 SDHBP21912 280 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 GGCXP38435 758 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 SLC11A2P49281 568 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 IRAK1P51617 712 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 YWHAZP63104 245 aaKnown RBP11.28□□□□□ -0.6
SF3A1-203ENST00000444440 LMAN2Q12907 356 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 NNTQ13423 1086 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 RAPGEF1Q13905 1077 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 EIF4HQ15056 248 aaKnown RBP11.28□□□□□ -0.6
SF3A1-203ENST00000444440 KRT31Q15323 416 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 C2CD6Q53TS8 623 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 DCAF6Q58WW2 860 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms