RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 LIG4P49917 911 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TUBP50607 506 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 CCT8P50990 548 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 GPC3P51654 580 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 BNIP3Q12983 259 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 DMP1Q13316 513 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TIGD2Q4W5G0 525 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 LRRC24Q50LG9 513 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 UTS2BQ765I0 119 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ALYREFQ86V81 257 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 SLC7A5P1Q8MH63 180 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 SDR16C5Q8N3Y7 309 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ATG4AQ8WYN0 398 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 C12orf43Q96C57 262 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 NXNL1Q96CM4 212 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 C8orf48Q96LL4 319 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ZNF285Q96NJ3 590 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 NACC1Q96RE7 527 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 YTHDF1Q9BYJ9 559 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ZNF408Q9H9D4 720 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ANKHQ9HCJ1 492 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PNPLA8Q9NP80 782 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 LRRC4BQ9NT99 713 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TRMT13Q9NUP7 481 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 RBAK-RBAKDNI3L0D1 243 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TRAFD1O14545 582 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 SULT1B1O43704 296 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TOP3BO95985 862 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 RASA1P20936 1047 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 DLG1Q12959 904 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 UGP2Q16851 508 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 FAM98BQ52LJ0 330 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ERAP2Q6P179 960 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 DENND5BQ6ZUT9 1274 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ASRGL1Q7L266 308 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PTF1AQ7RTS3 328 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PHC2Q8IXK0 858 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 MARVELD2Q8N4S9 558 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ZSCAN18Q8TBC5 510 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 RTFDC1Q9BY42 306 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ZNF696Q9H7X3 374 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PCDH9Q9HC56 1237 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 OSGEPQ9NPF4 335 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 KBTBD4Q9NVX7 518 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TTLL3Q9Y4R7 772 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 USP31Q70CQ4 1352 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 RGSL1A5PLK6 1076 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PRR5-ARHGAP8B1AHC4 643 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TMCC2O75069 709 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 OR6B1O95007 311 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 UGT2B4P06133 528 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 GZMAP12544 262 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TGM2P21980 687 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TALDO1P37837 337 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 GRIK1P39086 918 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 QARSP47897 775 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 SEPHS1P49903 392 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 VAMP7P51809 220 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ARHGAP8P85298 464 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 COX10Q12887 443 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 NFX1Q12986 1120 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PRKAA1Q13131 559 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ATP13A5Q4VNC0 1218 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TNFAIP8L3Q5GJ75 292 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 LDLRAP1Q5SW96 308 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 STYK1Q6J9G0 422 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 EFL1Q7Z2Z2 1120 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 STRA8Q7Z7C7 330 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 XXYLT1Q8NBI6 393 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 CCNYQ8ND76 341 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 SDR42E1Q8WUS8 393 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PTCD3Q96EY7 689 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 HES6Q96HZ4 224 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 STRBPQ96SI9 672 aaKnown RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 SLC4A5Q9BY07 1137 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TMEM117Q9H0C3 514 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 NEUROG2Q9H2A3 272 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TASP1Q9H6P5 420 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ZNF556Q9HAH1 456 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 MKLN1Q9UL63 735 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ABCG2Q9UNQ0 655 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ADGRB1O14514 1584 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TYW5A2RUC4 315 aaKnown RBP5.26□□□□□ -1.57
SCN11A-202ENST00000444237 PTGES3LE9PB15 166 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 J3QRK9 145 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 CYP27B1O15528 508 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 FBXO21O94952 628 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 CSPG5O95196 566 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 GH1P01241 217 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 DBTP11182 482 aaKnown RBP5.26□□□□□ -1.57
SCN11A-202ENST00000444237 CDH1P12830 882 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 ITGALP20701 1170 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 GARTP22102 1010 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 TCEA1P23193 301 aaKnown RBP5.26□□□□□ -1.57
SCN11A-202ENST00000444237 IL4RP24394 825 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 ALDH1B1P30837 517 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 YWHABP31946 246 aaKnown RBP5.26□□□□□ -1.57
SCN11A-202ENST00000444237 PKNOX1P55347 436 aa5.26□□□□□ -1.57
SCN11A-202ENST00000444237 ANTXR2P58335 489 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms