RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CHST9Q7L1S5 443 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 SLC47A2Q86VL8 602 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 CCDC117Q8IWD4 279 aaPredicted RBP20.86■□□□□ 0.93
LRCH3-208ENST00000443727 HJURPQ8NCD3 748 aaPredicted RBP20.86■□□□□ 0.93
LRCH3-208ENST00000443727 GPT2Q8TD30 523 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 FCRL2Q96LA5 508 aaPredicted RBP20.86■□□□□ 0.93
LRCH3-208ENST00000443727 MRGPRX1Q96LB2 322 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 IRX2Q9BZI1 471 aaPredicted RBP20.86■□□□□ 0.93
LRCH3-208ENST00000443727 SLC6A17Q9H1V8 727 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 STIM2Q9P246 746 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 GGA2Q9UJY4 613 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 PCDHGC3Q9UN70 934 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 PLA2G4CQ9UP65 541 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 KCNA4P22459 653 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 HLA-FP30511 346 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 SLC6A4P31645 630 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 PTGER3P43115 390 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 SGSHP51688 502 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 FUT11Q495W5 492 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 FNDC3BQ53EP0 1204 aaKnown RBP20.85■□□□□ 0.93
LRCH3-208ENST00000443727 DCAF6Q58WW2 860 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 MPP7Q5T2T1 576 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 STPG1Q5TH74 334 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 LYSMD4Q5XG99 296 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 RNF43Q68DV7 783 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 SASS6Q6UVJ0 657 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 FAM71AQ8IYT1 594 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 AHI1Q8N157 1196 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 DEFB119Q8N690 84 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 ZNF557Q8N988 423 aaPredicted RBP20.85■□□□□ 0.93
LRCH3-208ENST00000443727 C1orf131Q8NDD1 294 aaKnown RBP20.85■□□□□ 0.93
LRCH3-208ENST00000443727 ENOX1Q8TC92 643 aaKnown RBP20.85■□□□□ 0.93
LRCH3-208ENST00000443727 CPXM1Q96SM3 734 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 LSM14BQ9BX40 385 aaKnown RBP20.85■□□□□ 0.93
LRCH3-208ENST00000443727 LHX5Q9H2C1 402 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 FAM204AQ9H8W3 233 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 PRDM16Q9HAZ2 1276 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 CD248Q9HCU0 757 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 RXFP3Q9NSD7 469 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 TAB2Q9NYJ8 693 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 THADAQ6YHU6 1953 aa20.85■□□□□ 0.93
LRCH3-208ENST00000443727 MED19A0JLT2 244 aaPredicted RBP20.84■□□□□ 0.93
LRCH3-208ENST00000443727 NDUFS2O75306 463 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 TRUB2O95900 331 aaKnown RBP20.84■□□□□ 0.93
LRCH3-208ENST00000443727 EPHX1P07099 455 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 PABPC1P11940 636 aaKnown RBP20.84■□□□□ 0.93
LRCH3-208ENST00000443727 CLCN1P35523 988 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 LIMK1P53667 647 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 CDK17Q00537 523 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 DRAP1Q14919 205 aaPredicted RBP20.84■□□□□ 0.93
LRCH3-208ENST00000443727 TAF5Q15542 800 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 ZC3H12AQ5D1E8 599 aaKnown RBP20.84■□□□□ 0.93
LRCH3-208ENST00000443727 EFHC1Q5JVL4 640 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 KLHDC7AQ5VTJ3 777 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 TMEM215Q68D42 235 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 NADSYN1Q6IA69 706 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 OR6B2Q6IFH4 312 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 MFN1Q8IWA4 741 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 WDTC1Q8N5D0 677 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 RNF34Q969K3 372 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 EDEM2Q9BV94 578 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 TJP2Q9UDY2 1190 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 SLC12A6Q9UHW9 1150 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 FHOD1Q9Y613 1164 aa20.84■□□□□ 0.93
LRCH3-208ENST00000443727 SYNJ2BP-COX16A0A087WUM0 186 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 IGHV1OR15-9A0A0B4J2B8 117 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 HSF2BPO75031 334 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 ATP5BP06576 529 aaKnown RBP20.83■□□□□ 0.93
LRCH3-208ENST00000443727 GLI1P08151 1106 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 DPP6P42658 865 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 KCNMA1Q12791 1236 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 ENPP2Q13822 863 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 C11orf57Q6ZUT1 292 aaPredicted RBP20.83■□□□□ 0.93
LRCH3-208ENST00000443727 SYT12Q8IV01 421 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 CARNMT1Q8N4J0 409 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 CYB5D2Q8WUJ1 264 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 DDX1Q92499 740 aaKnown RBP20.83■□□□□ 0.93
LRCH3-208ENST00000443727 SLC39A13Q96H72 371 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 NUCKS1Q9H1E3 243 aaKnown RBP20.83■□□□□ 0.93
LRCH3-208ENST00000443727 PLCB1Q9NQ66 1216 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 COX16Q9P0S2 106 aa20.83■□□□□ 0.93
LRCH3-208ENST00000443727 DNAH14Q0VDD8 3507 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 GRAP2O75791 330 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 POLR2EP19388 210 aaKnown RBP20.82■□□□□ 0.92
LRCH3-208ENST00000443727 PRKCHP24723 683 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 RPS24P62847 133 aaKnown RBP20.82■□□□□ 0.92
LRCH3-208ENST00000443727 CDH18Q13634 790 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 MS4A13Q5J8X5 152 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 MBLAC2Q68D91 279 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 FAM183BPQ6ZVS7 135 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 CHSY1Q86X52 802 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 TMPRSS6Q8IU80 811 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 DEFB106AQ8N104 65 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.82■□□□□ 0.92
LRCH3-208ENST00000443727 PRCCQ92733 491 aaPredicted RBP20.82■□□□□ 0.92
LRCH3-208ENST00000443727 BTN2A3PQ96KV6 586 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 VPS16Q9H269 839 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 ASNSD1Q9NWL6 643 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 DDIT4Q9NX09 232 aa20.82■□□□□ 0.92
LRCH3-208ENST00000443727 PATE3B3GLJ2 98 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms