RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SH2D3AQ9BRG2 576 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 RNF38Q9H0F5 515 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 SNX25Q9H3E2 840 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 KNL1Q8NG31 2342 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 ARHGEF9O43307 516 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 CFBP00751 764 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 SREBF1P36956 1147 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 ETV4P43268 484 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 UNC5AQ6ZN44 842 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 AGR3Q8TD06 166 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 EBNA1BP2Q99848 306 aaKnown RBP5.15□□□□□ -1.59
HERC1-201ENST00000443617 ADAMTS10Q9H324 1103 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 CRYBG1Q9Y4K1 1723 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 KIDINS220Q9ULH0 1771 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 GOLGA8CPA6NN73 597 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 CXorf49A8MYA2 514 aaPredicted RBP5.15□□□□□ -1.59
HERC1-201ENST00000443617 SLC7A1P30825 629 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 PTPN7P35236 360 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 GTF2IP78347 998 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 MAPRE2Q15555 327 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 AGKQ53H12 422 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 PPP6R3Q5H9R7 873 aaPredicted RBP5.15□□□□□ -1.59
HERC1-201ENST00000443617 MTX3Q5HYI7 312 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 SLC9A4Q6AI14 798 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 KCTD8Q6ZWB6 473 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 MAGED4Q96JG8 741 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 BCAS3Q9H6U6 928 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 FANCEQ9HB96 536 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 GGA1Q9UJY5 639 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 PEAK1Q9H792 1746 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 TESPA1A2RU30 521 aaPredicted RBP5.15□□□□□ -1.59
HERC1-201ENST00000443617 TRIM64CA6NLI5 447 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 TRIM13O60858 407 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 APOFQ13790 326 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 TIFABQ6ZNK6 161 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 FRMD7Q6ZUT3 714 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 SV2AQ7L0J3 742 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 MCUQ8NE86 351 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 MOV10Q9HCE1 1003 aaKnown RBP5.15□□□□□ -1.59
HERC1-201ENST00000443617 VWA5AO00534 786 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 PPP1R11O60927 126 aaPredicted RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 RFTN1Q14699 578 aaPredicted RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 SNX17Q15036 470 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 CYP2R1Q6VVX0 501 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 BHMTQ93088 406 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 CEP44Q9C0F1 390 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 CD320Q9NPF0 282 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 IPO11Q9UI26 975 aaKnown RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 ADRB2P07550 413 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 PRKG1Q13976 671 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 DPH6Q7L8W6 267 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 GPR180Q86V85 440 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 ASNSD1Q9NWL6 643 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 UBAP1LF5GYI3 381 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 SLC22A2O15244 555 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 EXTL3O43909 919 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 EPHA3P29320 983 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 ALDH3B2P48448 385 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 MAPK10P53779 464 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 NME5P56597 212 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 ARL13BQ3SXY8 428 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 PTAR1Q7Z6K3 402 aaPredicted RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 ANKRD13AQ8IZ07 590 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 TNS4Q8IZW8 715 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 CCDC24Q8N4L8 307 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 SNX31Q8N9S9 440 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 ZNF384Q8TF68 577 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 UNKQ9C0B0 810 aaKnown RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 IL1RL2Q9HB29 575 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 DDX28Q9NUL7 540 aaKnown RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 EVPLLA8MZ36 301 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 TAF4O00268 1085 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 ATP2B4P23634 1241 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 ARL1P40616 181 aaPredicted RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 LLGL2Q6P1M3 1020 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 UBR7Q8N806 425 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 PCDH12Q9NPG4 1184 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 SETD1AO15047 1707 aaKnown RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 hCG_1818297A0A087WSY0 165 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 VAPBO95292 243 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 PHC1P78364 1004 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 PPP2R5DQ14738 602 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 SLFN12LQ6IEE8 588 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 PGM2L1Q6PCE3 622 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 C9orf16Q9BUW7 83 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 CHEK2O96017 543 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 CYP3A4P08684 503 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 KPNA1P52294 538 aaPredicted RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 SESN2P58004 480 aaPredicted RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 STX5Q13190 355 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 CUL2Q13617 745 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 SMAD1Q15797 465 aaKnown RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 PGS1Q32NB8 556 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 BROXQ5VW32 411 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 SLC15A4Q8N697 577 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 CDH19Q9H159 772 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 VPS33BQ9H267 617 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 SMARCAD1Q9H4L7 1026 aa5.14□□□□□ -1.59
HERC1-201ENST00000443617 PTBP2Q9UKA9 531 aaKnown RBP5.14□□□□□ -1.59
HERC1-201ENST00000443617 B3GNT3Q9Y2A9 372 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms