RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ENDOD1O94919 500 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 GPD1P21695 349 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 RRM1P23921 792 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 SLC6A11P48066 632 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 CXCR3P49682 368 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 ZNF75DP51815 510 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 PTPN5P54829 565 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 PITX1P78337 314 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-211ENST00000443563 MRPS21P82921 87 aaKnown RBP11.23□□□□□ -0.61
HDAC6-211ENST00000443563 KDSRQ06136 332 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 TBX2Q13207 712 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-211ENST00000443563 ARL13BQ3SXY8 428 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 HSF5Q4G112 596 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-211ENST00000443563 FAM133BQ5BKY9 247 aaKnown RBP11.23□□□□□ -0.61
HDAC6-211ENST00000443563 RABGAP1LQ5R372 815 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 STRADAQ7RTN6 431 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 TRMT11Q7Z4G4 463 aaKnown RBP11.23□□□□□ -0.61
HDAC6-211ENST00000443563 PHLDB2Q86SQ0 1253 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 C12orf40Q86WS4 652 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 CHSY1Q86X52 802 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 SPEM1Q8N4L4 309 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 EMC1Q8N766 993 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 TERB1Q8NA31 727 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 OLIG1Q8TAK6 271 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 BHMTQ93088 406 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 ACDQ96AP0 544 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 CFAP57Q96MR6 1250 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 FBRSL1Q9HCM7 1045 aaKnown RBP11.23□□□□□ -0.61
HDAC6-211ENST00000443563 RBM12Q9NTZ6 932 aaKnown RBP11.23□□□□□ -0.61
HDAC6-211ENST00000443563 PIGVQ9NUD9 493 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 ARHGEF38Q9NXL2 777 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 TAS2R14Q9NYV8 317 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 PLK2Q9NYY3 685 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 ARHGAP20Q9P2F6 1191 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 FBXO10Q9UK96 956 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 FBXO4Q9UKT5 387 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 SLC27A6Q9Y2P4 619 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 F5P12259 2224 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 ZDBF2Q9HCK1 2354 aa11.23□□□□□ -0.61
HDAC6-211ENST00000443563 TCRBV5S1A1TA0A578 114 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 K7EQS6 105 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 GFRA2O00451 464 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 AP5Z1O43299 807 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 TBL1XO60907 577 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 RNF40O75150 1001 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 COL9A1P20849 921 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 TACR2P21452 398 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 RFC1P35251 1148 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-211ENST00000443563 CXCL12P48061 93 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 ATP11AP98196 1134 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 MTAPQ13126 283 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-211ENST00000443563 MS4A13Q5J8X5 152 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 CCDC122Q5T0U0 273 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 RAP1GAP2Q684P5 730 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 PLEKHA7Q6IQ23 1121 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 ALKBH5Q6P6C2 394 aaKnown RBP11.22□□□□□ -0.61
HDAC6-211ENST00000443563 RFWD3Q6PCD5 774 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 WDR59Q6PJI9 974 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 BNIPLQ7Z465 357 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 PHTF2Q8N3S3 785 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 JOSD2Q8TAC2 188 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 UCMAQ8WVF2 138 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 ZNF653Q96CK0 615 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 CCDC42Q96M95 316 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 MCEEQ96PE7 176 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 HAPLN3Q96S86 360 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 NCAPGQ9BPX3 1015 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 CNPY3Q9BT09 278 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 TKTL2Q9H0I9 626 aa11.22□□□□□ -0.61
HDAC6-211ENST00000443563 CNOT8Q9UFF9 292 aaKnown RBP11.22□□□□□ -0.61
HDAC6-211ENST00000443563 A0A087X0T9 212 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 GOLGA6L7A0A1B0GV03 622 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 NPC1O15118 1278 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 TIMM44O43615 452 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 AKR1B10O60218 316 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 PAPSS2O95340 614 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 PLEKP08567 350 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 CISD3P0C7P0 127 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 FAM228BP0C875 321 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 HOXD9P28356 352 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 SLC6A4P31645 630 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 EIF4A3P38919 411 aaKnown RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 ZNF143P52747 638 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 NRLP54845 237 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 ADKP55263 362 aaKnown RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 OXCT1P55809 520 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 MAMLD1Q13495 774 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 EIF4HQ15056 248 aaKnown RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 ANGPT1Q15389 498 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 SLC18A3Q16572 532 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 CDO1Q16878 200 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 ZNF528Q3MIS6 628 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 CCDC14Q49A88 953 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 C10orf76Q5T2E6 689 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 OTUD1Q5VV17 481 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 NAIF1Q69YI7 327 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 NADSYN1Q6IA69 706 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 LRRC31Q6UY01 552 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms