RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 MTMR9Q96QG7 549 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 NACC1Q96RE7 527 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 LRRC1Q9BTT6 524 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 RABEP2Q9H5N1 569 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 SLC39A2Q9NP94 309 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 PLCB1Q9NQ66 1216 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 ARHGEF4Q9NR80 690 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 HAUS2Q9NVX0 235 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 NOP53Q9NZM5 478 aaKnown RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 CNTN3Q9P232 1028 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 STIM2Q9P246 746 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 RWDD2AQ9UIY3 292 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 FBXO2Q9UK22 296 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 MAGED2Q9UNF1 606 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 USP20Q9Y2K6 914 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 CREBBPQ92793 2442 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 ANAPC1Q9H1A4 1944 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 STK36Q9NRP7 1315 aa6.77□□□□□ -1.32
HDAC6-210ENST00000441703 A0A1B0GVT2 93 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 CCT8L1PA6NM43 557 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 E7EVH7 732 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 PDLIM1O00151 329 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 BCAT2O15382 392 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 POLR2DO15514 142 aaKnown RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 BUB1BO60566 1050 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 SRGAP2O75044 1071 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ADAM23O75077 832 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 COQ9O75208 318 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 TACC1O75410 805 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 RTN3O95197 1032 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ANP32DO95626 131 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 F11P03951 625 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 C1SP09871 688 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 NCAM1P13591 858 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ATF6P18850 670 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 CCND1P24385 295 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 GRIA2P42262 883 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 WASP42768 502 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 PAFAH1B1P43034 410 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 TNFRSF4P43489 277 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ATP1A2P50993 1020 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 NFKB2Q00653 900 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ROR2Q01974 943 aaKnown RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 GUCY1A3Q02108 690 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 C2orf54Q08AI8 447 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 DMP1Q13316 513 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 PDIA5Q14554 519 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ITIH4Q14624 930 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 KCNB1Q14721 858 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 TEAD4Q15561 434 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ZNF568Q3ZCX4 644 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 SLC39A12Q504Y0 691 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 HAUS3Q68CZ6 603 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 NUDT18Q6ZVK8 323 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 GSPT2Q8IYD1 628 aaKnown RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 SH3RF2Q8TEC5 729 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 PIGOQ8TEQ8 1089 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 NSMCE1Q8WV22 266 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 WASF1Q92558 559 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 C18orf25Q96B23 403 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 HVCN1Q96D96 273 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 GDAP1L1Q96MZ0 367 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ZNF578Q96N58 590 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 CHP1Q99653 195 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ARHGAP9Q9BRR9 750 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 CDT1Q9H211 546 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 LINC00597Q9H2U6 94 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 TMEM206Q9H813 350 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ZNHIT6Q9NWK9 470 aaKnown RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 UXTQ9UBK9 157 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 DMGDHQ9UI17 866 aaKnown RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 TNFSF13BQ9Y275 285 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 LUC7L2Q9Y383 392 aaKnown RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 HYOU1Q9Y4L1 999 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-210ENST00000441703 ABCA12Q86UK0 2595 aa6.77□□□□□ -1.33
HDAC6-210ENST00000441703 E2F8A0AVK6 867 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 GRID2IPA4D2P6 1211 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 TBC1D3BA6NDS4 549 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 RNF225M0QZC1 329 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 LAD1O00515 517 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 LDOC1O95751 146 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 BMP15O95972 392 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 CYP17A1P05093 508 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 RPSAP08865 295 aaKnown RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 CSH1P0DML2 217 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 CSH2P0DML3 217 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 ODC1P11926 461 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 IDEP14735 1019 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 CD44P16070 742 aaKnown RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 NDUFV2P19404 249 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 TYMPP19971 482 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 DRD4P21917 467 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 GLDCP23378 1020 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 CD6P30203 668 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 EIF2DP41214 584 aaKnown RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 KIR2DL1P43626 348 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SLC6A11P48066 632 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SEC24CP53992 1094 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SSRP1Q08945 709 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms