RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 OR2T3Q8NH03 318 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 IRGQQ8WZA9 623 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 TFAP2BQ92481 460 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 GATA6Q92908 595 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 TMEM121BQ9BXQ6 578 aaPredicted RBP12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 PCED1AQ9H1Q7 454 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 ABCB8Q9NUT2 735 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 NEUROG3Q9Y4Z2 214 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 PCDHB4Q9Y5E5 795 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 SPEGQ15772 3267 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 PCDH15Q96QU1 1955 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 METTL12A8MUP2 240 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 P4HA2O15460 535 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 MSI1O43347 362 aaKnown RBP12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 SH3BP5O60239 455 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 LTFP02788 710 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 C7P10643 843 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 SLC11A2P49281 568 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 RGS7P49802 495 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 FAM193AP78312 1265 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 NUCB2P80303 420 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 RING1Q06587 406 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 GRIK2Q13002 908 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 ZNF423Q2M1K9 1284 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 MPP7Q5T2T1 576 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 DCAF12L1Q5VU92 463 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 NUGGCQ68CJ6 796 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 PMF1Q6P1K2 205 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 CHST9Q7L1S5 443 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 ELOA2Q8IYF1 753 aaPredicted RBP12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 PPM1KQ8N3J5 372 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 GOLGA1Q92805 767 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 AZIN2Q96A70 460 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 HSFY1Q96LI6 401 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 MIR1-1HGQ9H1L0 117 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 TMEM245Q9H330 911 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 FBRSQ9HAH7 460 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 GGA2Q9UJY4 613 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 ZMIZ1Q9ULJ6 1067 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 MSRB2Q9Y3D2 182 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 PCDHB9Q9Y5E1 797 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 FREM2Q5SZK8 3169 aa12.11□□□□□ -0.47
UBE2D4-204ENST00000440899 FAM208BQ5VWN6 2430 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 ADAMTS9Q9P2N4 1935 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 RNF225M0QZC1 329 aaPredicted RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 BCAT2O15382 392 aaPredicted RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 IRAK2O43187 625 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 GABBR2O75899 941 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 FBXO21O94952 628 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 IGLV3-27P01718 113 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 ATP5BP06576 529 aaKnown RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 PABPC1P11940 636 aaKnown RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 HLA-EP13747 358 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 ZBTB16Q05516 673 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 BECN1Q14457 450 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 TRIP6Q15654 476 aaKnown RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 PIK3R6Q5UE93 754 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 FOXR2Q6PJQ5 311 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 ADIPOR2Q86V24 386 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 AHI1Q8N157 1196 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 ZCCHC9Q8N567 271 aaKnown RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 ZNF557Q8N988 423 aaPredicted RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 LMO3Q8TAP4 145 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 CYB5D2Q8WUJ1 264 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 ZSWIM1Q9BR11 485 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 LHX5Q9H2C1 402 aa12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 EIF2B4Q9UI10 523 aaKnown RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 DSPP15924 2871 aaKnown RBP12.1□□□□□ -0.47
UBE2D4-204ENST00000440899 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 BICDL2A1A5D9 508 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 FAM221BA6H8Z2 402 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 M0QYV0 167 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 PIK3R2O00459 728 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 ACSL4O60488 711 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 TBL1XO60907 577 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 CER1O95813 267 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 DLDP09622 509 aaKnown RBP12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 ZNF883P0CG24 379 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 POLR2EP19388 210 aaKnown RBP12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 BRD2P25440 801 aaKnown RBP12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 SGSHP51688 502 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 TBX4P57082 545 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 GCNT1Q02742 428 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 FAM133BQ5BKY9 247 aaKnown RBP12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 MBLAC2Q68D91 279 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 KLHL10Q6JEL2 608 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 TTI2Q6NXR4 508 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 RFWD3Q6PCD5 774 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 IL27RAQ6UWB1 636 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 RAB44Q7Z6P3 723 aaPredicted RBP12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 FAM124AQ86V42 546 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 CACUL1Q86Y37 369 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 NAXDQ8IW45 347 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 CHCHD4Q8N4Q1 142 aa12.09□□□□□ -0.47
UBE2D4-204ENST00000440899 ZNF366Q8N895 744 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms