RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SERPING1P05155 500 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 CISD3P0C7P0 127 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 SP9P0CG40 484 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 TACR2P21452 398 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 RRM1P23921 792 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 GGCXP38435 758 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 DEUP1Q05D60 604 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 TRIM14Q14142 442 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 PPP2R5DQ14738 602 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 RAB6CQ53S08 254 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 EMC10Q5UCC4 262 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 PIK3R6Q5UE93 754 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 RXFP2Q8WXD0 754 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 TMA16Q96EY4 203 aaKnown RBP18.7■□□□□ 0.58
CPSF4-205ENST00000440514 DDX50Q9BQ39 737 aaKnown RBP18.7■□□□□ 0.58
CPSF4-205ENST00000440514 SELENOOQ9BVL4 669 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 TRIM5Q9C035 493 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 RAB6CQ9H0N0 254 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 ANLNQ9NQW6 1124 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 FBXO10Q9UK96 956 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 C2CD4BA6NLJ0 364 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 CHURC1-FNTBB4DL54 471 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 ADCY5O95622 1261 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 SLC2A3P11169 496 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 KRT3P12035 628 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 ABCB4P21439 1286 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 TIE1P35590 1138 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 KIR2DL1P43626 348 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-205ENST00000440514 CXCL12P48061 93 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 CXCR3P49682 368 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 RPS24P62847 133 aaKnown RBP18.69■□□□□ 0.58
CPSF4-205ENST00000440514 ATP11AP98196 1134 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 CDO1Q16878 200 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 C15orf59Q2T9L4 293 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-205ENST00000440514 MS4A13Q5J8X5 152 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 ARCQ7LC44 396 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 BNIPLQ7Z465 357 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 LGI2Q8N0V4 545 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 HJURPQ8NCD3 748 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-205ENST00000440514 WFDC5Q8TCV5 224 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 PGAP3Q96FM1 320 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-205ENST00000440514 MCEEQ96PE7 176 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 STIM2Q9P246 746 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 FBXO4Q9UKT5 387 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 WDFY4Q6ZS81 3184 aa18.69■□□□□ 0.58
CPSF4-205ENST00000440514 A0A0A0MRY4 1105 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 PRRT4C9JH25 899 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 I6L893 689 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-205ENST00000440514 PAGE1O75459 146 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 TDGF1P13385 188 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 PDGFRAP16234 1089 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 SDC4P31431 198 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 RDXP35241 583 aaKnown RBP18.68■□□□□ 0.58
CPSF4-205ENST00000440514 RFC1P35251 1148 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-205ENST00000440514 TNFRSF4P43489 277 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 NHLH1Q02575 133 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 GEN1Q17RS7 908 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 CCDC14Q49A88 953 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 PREPLQ4J6C6 727 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-205ENST00000440514 PPP1R15BQ5SWA1 713 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 PPP1R2P3Q6NXS1 205 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 MAMSTRQ6ZN01 415 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 SND1Q7KZF4 910 aaKnown RBP eCLIP18.68■□□□□ 0.58
CPSF4-205ENST00000440514 TMC6Q7Z403 805 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 CFAP52Q8N1V2 620 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 CCDC33Q8N5R6 958 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 ALLCQ8N6M5 410 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 ATOH1Q92858 354 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-205ENST00000440514 ACDQ96AP0 544 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 PRMT1Q99873 361 aaKnown RBP18.68■□□□□ 0.58
CPSF4-205ENST00000440514 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.68■□□□□ 0.58
CPSF4-205ENST00000440514 TKTL2Q9H0I9 626 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 TMPRSS4Q9NRS4 437 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 TMEM51Q9NW97 253 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 ARHGAP20Q9P2F6 1191 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 SLC12A6Q9UHW9 1150 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 HCN2Q9UL51 889 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 SLC27A6Q9Y2P4 619 aa18.68■□□□□ 0.58
CPSF4-205ENST00000440514 ARIH1Q9Y4X5 557 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-205ENST00000440514 CACNA1HO95180 2353 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 F5H5T6 163 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 K7ESF4 209 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 MFAP3LO75121 409 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 ATG13O75143 517 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 PAPSS2O95340 614 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-205ENST00000440514 KLF8O95600 359 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-205ENST00000440514 FTLP02792 175 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-205ENST00000440514 GPD1P21695 349 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 PTPN9P43378 593 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 DMWDQ09019 674 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 BRMS1LQ5PSV4 323 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 SH3PXD2AQ5TCZ1 1133 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 EGFLAMQ63HQ2 1017 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 RNF43Q68DV7 783 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 ANKS1BQ7Z6G8 1248 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 CIR1Q86X95 450 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-205ENST00000440514 FAM131BQ86XD5 332 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 IL17RCQ8NAC3 791 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 ZNF653Q96CK0 615 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 DNAJC7Q99615 494 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms