RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ASS1P00966 412 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 LAMP2P13473 410 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ATF6P18850 670 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 COL9A1P20849 921 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ATICP31939 592 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 EPHB3P54753 998 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 USP46P62068 366 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 RAB33AQ14088 237 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SGSM1Q2NKQ1 1148 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ODF2Q5BJF6 829 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 XKR4Q5GH76 650 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 GPR158Q5T848 1215 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 NAIF1Q69YI7 327 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PDE12Q6L8Q7 609 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 LILRA6Q6PI73 481 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 C4orf22Q6V702 233 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PPP1R21Q6ZMI0 780 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 RGS9BPQ6ZS82 235 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ANKS1BQ7Z6G8 1248 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PIGWQ7Z7B1 504 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PHLDB2Q86SQ0 1253 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 UBA3Q8TBC4 463 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ZSCAN18Q8TBC5 510 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 FBXO25Q8TCJ0 367 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SLC2A14Q8TDB8 520 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 NKD2Q969F2 451 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SLC22A12Q96S37 553 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CDCA3Q99618 268 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TRIM51Q9BSJ1 452 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PLA2G2FQ9BZM2 168 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PLEKHA4Q9H4M7 779 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 APOBEC3GQ9HC16 384 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 WDR6Q9NNW5 1121 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CRTAC1Q9NQ79 661 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 COX16Q9P0S2 106 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ANAPC7Q9UJX3 599 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 NOVA2Q9UNW9 492 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SSX2IPQ9Y2D8 614 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ATP8A1Q9Y2Q0 1164 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CACNA1EQ15878 2313 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PLXNA3P51805 1871 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TCRBV5S1A1TA0A578 114 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 E7EVH7 732 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SYN3O14994 580 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CDH16O75309 829 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TTC4O95801 387 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ERBB2P04626 1255 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ITGAVP06756 1048 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PTPN2P17706 415 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 DRD4P21917 467 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MMP8P22894 467 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 IVDP26440 423 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 LRPAP1P30533 357 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 GDI1P31150 447 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SKIV2L2P42285 1042 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MTHFRP42898 656 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PXNP49023 591 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 RGS7P49802 495 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MAGOHP61326 146 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CCDC15Q0P6D6 951 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 VEPH1Q14D04 833 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 MORF4L2Q15014 288 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PPP1R7Q15435 360 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TAZQ16635 292 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 C2CD6Q53TS8 623 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SLC8B1Q6J4K2 584 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TTC27Q6P3X3 843 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TMEM270Q6UE05 265 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CCDC121Q6ZUS5 278 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 GAREM2Q75VX8 874 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 OTOP3Q7RTS5 596 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 PASD1Q8IV76 773 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ARID3BQ8IVW6 561 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 NPAS3Q8IXF0 933 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 RNF168Q8IYW5 571 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ZCCHC9Q8N567 271 aaKnown RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SH2D3CQ8N5H7 860 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ARL14EPQ8N8R7 260 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 TMEM35BQ8NCS4 154 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 KBTBD7Q8WVZ9 684 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 RAPGEF5Q92565 580 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 KRT35Q92764 455 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 C18orf8Q96DM3 657 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SGSM3Q96HU1 749 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CFAP57Q96MR6 1250 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ZNF317Q96PQ6 595 aaPredicted RBP4.94□□□□□ -1.62
EDEM3-203ENST00000439962 DPH5Q9H2P9 285 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 BRD9Q9H8M2 597 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CYP3A43Q9HB55 503 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 KRT82Q9NSB4 513 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 ITGA11Q9UKX5 1188 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 KIAA1257Q9ULG3 409 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 SHOC2Q9UQ13 582 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 CEP83Q9Y592 693 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 COL4A3Q01955 1670 aa4.94□□□□□ -1.62
EDEM3-203ENST00000439962 LOC400499M0QZD8 3231 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 M0QZQ0 153 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 AP1G2O75843 785 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 PRAMEF12O95522 483 aa4.93□□□□□ -1.62
EDEM3-203ENST00000439962 GNA15P30679 374 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms