RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 USP39Q53GS9 565 aaKnown RBP24.93■■□□□ 1.58
CPNE1-217ENST00000439669 KBTBD6Q86V97 674 aa24.93■■□□□ 1.58
CPNE1-217ENST00000439669 KIAA2013Q8IYS2 634 aa24.93■■□□□ 1.58
CPNE1-217ENST00000439669 HJURPQ8NCD3 748 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-217ENST00000439669 ZNF397Q8NF99 534 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-217ENST00000439669 CPA5Q8WXQ8 436 aa24.93■■□□□ 1.58
CPNE1-217ENST00000439669 RNF34Q969K3 372 aa24.93■■□□□ 1.58
CPNE1-217ENST00000439669 ERLEC1Q96DZ1 483 aa24.93■■□□□ 1.58
CPNE1-217ENST00000439669 PRICKLE1Q96MT3 831 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-217ENST00000439669 IRX2Q9BZI1 471 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-217ENST00000439669 XPO7Q9UIA9 1087 aaKnown RBP24.93■■□□□ 1.58
CPNE1-217ENST00000439669 INVSQ9Y283 1065 aa24.93■■□□□ 1.58
CPNE1-217ENST00000439669 GABRB2P47870 512 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 RNASE9P60153 205 aaKnown RBP24.92■■□□□ 1.58
CPNE1-217ENST00000439669 ARID5AQ03989 594 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 EIF4HQ15056 248 aaKnown RBP24.92■■□□□ 1.58
CPNE1-217ENST00000439669 FILIP1LQ4L180 1135 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 MPP7Q5T2T1 576 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 FAM102AQ5T9C2 384 aaPredicted RBP24.92■■□□□ 1.58
CPNE1-217ENST00000439669 CHSY1Q86X52 802 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 ATP6V0D2Q8N8Y2 350 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 BTN2A3PQ96KV6 586 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.92■■□□□ 1.582e-10■□□□□ 11.3
CPNE1-217ENST00000439669 ELOVL2Q9NXB9 296 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 SLC12A6Q9UHW9 1150 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 EML5Q05BV3 1969 aa24.92■■□□□ 1.58
CPNE1-217ENST00000439669 EP300Q09472 2414 aaPredicted RBP24.92■■□□□ 1.58
CPNE1-217ENST00000439669 GOLGA8SH3BPF8 625 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 DCLK1O15075 740 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 ZBTB24O43167 697 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-217ENST00000439669 TEX33O43247 280 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 RETP07949 1114 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 SLC2A3P11169 496 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 HLA-FP30511 346 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 NOS2P35228 1153 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 FMO1Q01740 532 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 NME3Q13232 169 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 C2CD6Q53TS8 623 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 MS4A13Q5J8X5 152 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 RAP1GAP2Q684P5 730 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 XYLT1Q86Y38 959 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 WFIKKN2Q8TEU8 576 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 GABRG3Q99928 467 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 RTN4Q9NQC3 1192 aaKnown RBP24.91■■□□□ 1.58
CPNE1-217ENST00000439669 ABCB8Q9NUT2 735 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 RAD54BQ9Y620 910 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 STON1Q9Y6Q2 735 aa24.91■■□□□ 1.58
CPNE1-217ENST00000439669 PABPC1P11940 636 aaKnown RBP24.9■■□□□ 1.58
CPNE1-217ENST00000439669 CHRNB2P17787 502 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 ABCB4P21439 1286 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 CCR1P32246 355 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 MATKP42679 507 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 RPS24P62847 133 aaKnown RBP24.9■■□□□ 1.58
CPNE1-217ENST00000439669 IQCB1Q15051 598 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 TRIM72Q6ZMU5 477 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 CHST9Q7L1S5 443 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 MFN1Q8IWA4 741 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 LGI2Q8N0V4 545 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 SORCS1Q8WY21 1168 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 MYEOVQ96EZ4 313 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.9■■□□□ 1.58
CPNE1-217ENST00000439669 GGA2Q9UJY4 613 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 STAP1Q9ULZ2 295 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 USP18Q9UMW8 372 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 USP34Q70CQ2 3546 aa24.9■■□□□ 1.58
CPNE1-217ENST00000439669 A0A1W2PQF6 199 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 WASH3PC4AMC7 463 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 M0QYT0 321 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 NPC1O15118 1278 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 TACR2P21452 398 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 SCNN1AP37088 669 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 SULT1E1P49888 294 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 TPM4P67936 248 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 SPEM2Q0P670 501 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 EIF4EBP2Q13542 120 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-217ENST00000439669 E2F5Q15329 346 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 ELF2Q15723 593 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 KIAA1211LQ6NV74 962 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 MMS22LQ6ZRQ5 1243 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 CCDC117Q8IWD4 279 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-217ENST00000439669 AHI1Q8N157 1196 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 CFAP52Q8N1V2 620 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 CARNMT1Q8N4J0 409 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 ZNF557Q8N988 423 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-217ENST00000439669 WFDC5Q8TCV5 224 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 SPACA7Q96KW9 195 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 CBX8Q9HC52 389 aa24.89■■□□□ 1.58
CPNE1-217ENST00000439669 THAP10Q9P2Z0 257 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-217ENST00000439669 KCNU1A8MYU2 1149 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 F5H5T6 163 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 TIMM44O43615 452 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 CYP1A1P04798 512 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-217ENST00000439669 GABRG2P18507 467 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 IL12RB1P42701 662 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 CDH18Q13634 790 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 ZNF234Q14588 700 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 STARD3Q14849 445 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 PLK5Q496M5 336 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 TMEM215Q68D42 235 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 C11orf74Q86VG3 221 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms