RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 IDO1P14902 403 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ETV3P41162 512 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ZNF135P52742 658 aaPredicted RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 BTKQ06187 659 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 PDAP1Q13442 181 aaKnown RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 AARS2Q5JTZ9 985 aaKnown RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 TUBA3EQ6PEY2 450 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 TRABD2AQ86V40 505 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 SLC26A11Q86WA9 606 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.53□□□□□ -1.36
BDNF-211ENST00000439476 ABRAQ8N0Z2 381 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 VCPIP1Q96JH7 1222 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 PPP1R36Q96LQ0 422 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ZBED2Q9BTP6 218 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 TARS2Q9BW92 718 aaKnown RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 EFCAB1Q9HAE3 211 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 INIPQ9NRY2 104 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 PRKAG2Q9UGJ0 569 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ATP11BQ9Y2G3 1177 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 AP3M1Q9Y2T2 418 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 DTNAQ9Y4J8 743 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 MYH2Q9UKX2 1941 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 TOPAZ1Q8N9V7 1692 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 RRN3P2A6NIE6 340 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ANKRD63C9JTQ0 380 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 M0R3G1 203 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 NEMP1O14524 444 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 SOAT2O75908 522 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 NPTXRO95502 500 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 SLC4A1P02730 911 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ABHD2P08910 425 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 RALBP11234 206 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 KCNK10P57789 538 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 GCNT1Q02742 428 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 NAB1Q13506 487 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ACAP1Q15027 740 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 TTLL9Q3SXZ7 439 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ZBTB41Q5SVQ8 909 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 DCP1BQ8IZD4 617 aaKnown RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 GALNT4Q8N4A0 578 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ACER1Q8TDN7 264 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 SH3KBP1Q96B97 665 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ZNF668Q96K58 619 aaPredicted RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 SPATA33Q96N06 139 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 CATSPER2Q96P56 530 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 MMP19Q99542 508 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ATP13A3Q9H7F0 1226 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 CCDC177Q9NQR7 707 aaPredicted RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 DRG1Q9Y295 367 aaKnown RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 DDTLA6NHG4 134 aaPredicted RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 NCAM2O15394 837 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 AKAP10O43572 662 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 HBP1O60381 514 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 PPP1R11O60927 126 aaPredicted RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 NDUFS3O75489 264 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 GJB6O95452 261 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 CYBBP04839 570 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ETS1P14921 441 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 RPL17P18621 184 aaKnown RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 WEE1P30291 646 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ELK3P41970 407 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ATXN3P54252 364 aaPredicted RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 MRPS15P82914 257 aaKnown RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 ITGA9Q13797 1035 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 NR1D2Q14995 579 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 RBBP7Q16576 425 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 DCAF4L1Q3SXM0 396 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 FAM209AQ5JX71 171 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 OTOAQ7RTW8 1153 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 HORMAD1Q86X24 394 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 SLC9A9Q8IVB4 645 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 SCN4BQ8IWT1 228 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 KATNAL2Q8IYT4 538 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 SCAIQ8N9R8 606 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 SHC3Q92529 594 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 NMD3Q96D46 503 aaKnown RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 WRNIP1Q96S55 665 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 PCDHB18PQ96TA0 734 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 ARHGEF3Q9NR81 526 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 ZNF229Q9UJW7 825 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 LSM7Q9UK45 103 aaKnown RBP6.53□□□□□ -1.36
BDNF-211ENST00000439476 SLC30A1Q9Y6M5 507 aa6.53□□□□□ -1.36
BDNF-211ENST00000439476 EEF2KO00418 725 aaKnown RBP6.52□□□□□ -1.37
BDNF-211ENST00000439476 C2CD2LO14523 706 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 ZNF254O75437 659 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 KRT75O95678 551 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 GSNP06396 782 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 MAPK1P28482 360 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 SERPINB1P30740 379 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 SULT1E1P49888 294 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 CCR3P51677 355 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 GEMP55040 296 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 DSTNP60981 165 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 C1QBPQ07021 282 aaKnown RBP6.52□□□□□ -1.37
BDNF-211ENST00000439476 GNA13Q14344 377 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 SLC35G1Q2M3R5 365 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 CLEC4FQ8N1N0 589 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 C2orf69Q8N8R5 385 aa6.52□□□□□ -1.37
BDNF-211ENST00000439476 RNF149Q8NC42 400 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms