RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ADRA1DP25100 572 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 THBS4P35443 961 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 ARHGAP25P42331 645 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 COPB1P53618 953 aaKnown RBP3.99□□□□□ -1.77
VPS41-207ENST00000439468 POLE2P56282 527 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 SUMO2P61956 95 aaKnown RBP3.99□□□□□ -1.77
VPS41-207ENST00000439468 GAB1Q13480 694 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 CEP78Q5JTW2 689 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 TTC22Q5TAA0 569 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 ANKRD45Q5TZF3 282 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 MIS18BP1Q6P0N0 1132 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 NFRKBQ6P4R8 1299 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 RFX8Q6ZV50 586 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 CHSY1Q86X52 802 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 CPOQ8IVL8 374 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 CLASRPQ8N2M8 674 aaKnown RBP3.99□□□□□ -1.77
VPS41-207ENST00000439468 TERB1Q8NA31 727 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 ASB12Q8WXK4 309 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 NPIPB3Q92617 1050 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 GOLGA1Q92805 767 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 REXO5Q96IC2 774 aaKnown RBP3.99□□□□□ -1.77
VPS41-207ENST00000439468 VPS50Q96JG6 964 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 COG8Q96MW5 612 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 SEMA4CQ9C0C4 833 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 ARHGAP39Q9C0H5 1083 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 ABHD16BQ9H3Z7 469 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 RMI1Q9H9A7 625 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 SAYSD1Q9NPB0 183 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 TRPC5Q9UL62 973 aaPredicted RBP3.99□□□□□ -1.77
VPS41-207ENST00000439468 GTF2A1LQ9UNN4 478 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 SLC12A4Q9UP95 1085 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 PCDHA10Q9Y5I2 948 aa3.99□□□□□ -1.77
VPS41-207ENST00000439468 ZNF804BA4D1E1 1349 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 FAM90A20PA6NIJ5 464 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 SLC38A8A6NNN8 435 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 UBE2Q2LH0YL09 131 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 EYA2O00167 538 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 PPP6CO00743 305 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 GCATO75600 419 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 TMIGD3P0DMS9 266 aaPredicted RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 SERPINA4P29622 427 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 GALNSP34059 522 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 IGHMBP2P38935 993 aaKnown RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 AARSP49588 968 aaKnown RBP eCLIP3.98□□□□□ -1.77
VPS41-207ENST00000439468 RPL15P61313 204 aaKnown RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 GPC5P78333 572 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 RAE1P78406 368 aaKnown RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 ST3GAL2Q16842 350 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 FAM110CQ1W6H9 321 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 AAK1Q2M2I8 961 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 SUPT20HL1Q3ZLR7 823 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 AWAT1Q58HT5 328 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 FBXO47Q5MNV8 452 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 PAPD7Q5XG87 772 aaKnown RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 SLC18B1Q6NT16 456 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 SLC2A7Q6PXP3 512 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 KIAA1324Q6UXG2 1013 aaKnown RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 RAB11FIP2Q7L804 512 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 NEK8Q86SG6 692 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 C2CD5Q86YS7 1000 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 ANKRD18AQ8IVF6 992 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.98□□□□□ -1.77
VPS41-207ENST00000439468 OR6Y1Q8NGX8 325 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 SPPL3Q8TCT6 385 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 CLEC4CQ8WTT0 213 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 RSC1A1Q92681 617 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 EDC3Q96F86 508 aaKnown RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 C5orf34Q96MH7 638 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 ASB2Q96Q27 587 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 MMS19Q96T76 1030 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 PAAF1Q9BRP4 392 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 THAP7Q9BT49 309 aaPredicted RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 ELOVL1Q9BW60 279 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 QTRT1Q9BXR0 403 aaKnown RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 ZCWPW1Q9H0M4 648 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 RIC8AQ9NPQ8 531 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 TRIM36Q9NQ86 728 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 IFT80Q9P2H3 777 aaPredicted RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 C19orf53Q9UNZ5 99 aaPredicted RBP3.98□□□□□ -1.77
VPS41-207ENST00000439468 ZBTB1Q9Y2K1 713 aa3.98□□□□□ -1.77
VPS41-207ENST00000439468 KCNU1A8MYU2 1149 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 FYB1O15117 783 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 NCAM2O15394 837 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 HEXIM1O94992 359 aaKnown RBP3.97□□□□□ -1.77
VPS41-207ENST00000439468 TJP3O95049 919 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 TUBB4AP04350 444 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 APEHP13798 732 aaKnown RBP3.97□□□□□ -1.77
VPS41-207ENST00000439468 TUBP50607 506 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 RBM5P52756 815 aaKnown RBP eCLIP3.97□□□□□ -1.77
VPS41-207ENST00000439468 DGKQP52824 942 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 KLF9Q13886 244 aaPredicted RBP3.97□□□□□ -1.77
VPS41-207ENST00000439468 ETFDHQ16134 617 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 TAF12Q16514 161 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 FAM187BQ17R55 369 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 ZNF569Q5MCW4 686 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 ACSM6Q6P461 480 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 GLCCI1Q86VQ1 547 aa3.97□□□□□ -1.77
VPS41-207ENST00000439468 C12orf76Q8N812 135 aaPredicted RBP3.97□□□□□ -1.77
VPS41-207ENST00000439468 PNPLA1Q8N8W4 532 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms