RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
ACTN1-204ENST00000438964 CCDC60Q8IWA6 550 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-204ENST00000438964 PCDH20Q8N6Y1 951 aaKnown RBP13.77□□□□□ -0.21
ACTN1-204ENST00000438964 ZDHHC15Q96MV8 337 aa13.77□□□□□ -0.21
ACTN1-204ENST00000438964 GMPR2Q9P2T1 348 aaKnown RBP13.77□□□□□ -0.21
ACTN1-204ENST00000438964 RNASEH2AO75792 299 aaKnown RBP13.76□□□□□ -0.21
ACTN1-204ENST00000438964 HSPA4LO95757 839 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 CLIC3O95833 236 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 JUNP05412 331 aaKnown RBP13.76□□□□□ -0.21
ACTN1-204ENST00000438964 KRT7P08729 469 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 HDCP19113 662 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 L1CAMP32004 1257 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 CRHR1P34998 444 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 MLH1P40692 756 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 ATXN1P54253 815 aaKnown RBP13.76□□□□□ -0.21
ACTN1-204ENST00000438964 IRF9Q00978 393 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 LRRC38Q5VT99 294 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 OGFOD2Q6N063 350 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 KCNT2Q6UVM3 1135 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 C4orf19Q8IY42 314 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 TSPAN14Q8NG11 270 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 MRPS26Q9BYN8 205 aaKnown RBP13.76□□□□□ -0.21
ACTN1-204ENST00000438964 NUF2Q9BZD4 464 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 ST6GALNAC4Q9H4F1 302 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 K7ERI5 159 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 RALBP11234 206 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 MPSTP25325 297 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 SLC5A3P53794 718 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 IL23RQ5VWK5 629 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 LAYNQ6UX15 382 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 XKR5Q6UX68 686 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 CLVS1Q8IUQ0 354 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-204ENST00000438964 KCTD17Q8N5Z5 321 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 CIB1Q99828 191 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 RRN3Q9NYV6 651 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 ITGA11Q9UKX5 1188 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 CDC14AQ9UNH5 594 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 RNF11Q9Y3C5 154 aa13.76□□□□□ -0.21
ACTN1-204ENST00000438964 STRNO43815 780 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 PLIN3O60664 434 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 ZC3H11AO75152 810 aaKnown RBP eCLIP13.75□□□□□ -0.21
ACTN1-204ENST00000438964 USP12O75317 370 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 LTFP02788 710 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 GLRBP48167 497 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 PRKCEQ02156 737 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 RALGDSQ12967 914 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 TRNP1Q6NT89 227 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 DSELQ8IZU8 1212 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 SYTL5Q8TDW5 730 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-204ENST00000438964 CHURC1Q8WUH1 139 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 JADE3Q92613 823 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 TWNKQ96RR1 684 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 XPNPEP3Q9NQH7 507 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 C20orf96Q9NUD7 363 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-204ENST00000438964 ADA2Q9NZK5 511 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 COL14A1Q05707 1796 aaKnown RBP13.75□□□□□ -0.21
ACTN1-204ENST00000438964 CKMT2P17540 419 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 EIF4BP23588 611 aaKnown RBP13.75□□□□□ -0.21
ACTN1-204ENST00000438964 TYK2P29597 1187 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 GBE1Q04446 702 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 ADGRE1Q14246 886 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 CHST15Q7LFX5 561 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-204ENST00000438964 SPATA6LQ8N4H0 392 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 LRTOMTQ8WZ04 291 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 WNK4Q96J92 1243 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 BTBD9Q96Q07 612 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 CDCA7Q9BWT1 371 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-204ENST00000438964 SLC4A5Q9BY07 1137 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 Q9H521 79 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 NRDE2Q9H7Z3 1164 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 COQ10BQ9H8M1 238 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 EPS15L1Q9UBC2 864 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 RSL24D1Q9UHA3 163 aaKnown RBP13.75□□□□□ -0.21
ACTN1-204ENST00000438964 SIPA1L1O43166 1804 aa13.75□□□□□ -0.21
ACTN1-204ENST00000438964 COL5A3P25940 1745 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ARHGAP10A1A4S6 786 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TRIM43BA6NCK2 446 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TTC36A6NLP5 189 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 MT-CO1P00395 513 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 OATP04181 439 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 PSMC3P17980 439 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 BCAR1P56945 870 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 NOMO1Q15155 1222 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 HSP90AA5PQ58FG0 334 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ARL10Q8N8L6 244 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 FNDC8Q8TC99 324 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TMEM79Q9BSE2 394 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 PAIP1Q9H074 479 aaKnown RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 SELENONQ9NZV5 590 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 SFMBT1Q9UHJ3 866 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 RIMS3Q9UJD0 308 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 SH3GLB1Q9Y371 365 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 SNX13Q9Y5W8 968 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 J3QRK9 145 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ZNF195O14628 629 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 DENRO43583 198 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms