RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ARL2BPQ9Y2Y0 163 aa11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 USP15Q9Y4E8 981 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 MGRN1O60291 552 aa11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 ANP32DO95626 131 aa11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 TAC1P20366 129 aa11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 LACTB2Q53H82 288 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 MRPL9Q9BYD2 267 aaKnown RBP11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 CDHR5Q9HBB8 845 aa11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 PFDN4Q9NQP4 134 aa11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 TLR8Q9NR97 1041 aaKnown RBP11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 ZDHHC18Q9NUE0 388 aa11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 TRMT13Q9NUP7 481 aaKnown RBP11.9□□□□□ -0.5
TRAPPC9-202ENST00000438773 COL24A1Q17RW2 1714 aa11.9□□□□□ -0.51
TRAPPC9-202ENST00000438773 SRRM3A6NNA2 597 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 F5H5T6 163 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 ITGAVP06756 1048 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 GOT1P17174 413 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 TARSP26639 723 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 TUBP50607 506 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 TBX4P57082 545 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 DCLRE1AQ6PJP8 1040 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 EFHBQ8N7U6 833 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 TSSK1BQ9BXA7 367 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 RBM22Q9NW64 420 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC24A2Q9UI40 661 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SIX4Q9UIU6 781 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 APOBEC2Q9Y235 224 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 ANGPTL3Q9Y5C1 460 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 PTCH2Q9Y6C5 1203 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 DPYSL4O14531 572 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 PPEF2O14830 753 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 MAP3K7O43318 606 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 GMNNO75496 209 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 CHKAP35790 457 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 PPARGP37231 505 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 PEX5P50542 639 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 BTG3Q14201 252 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 MMEL1Q495T6 779 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 MAMDC4Q6UXC1 1216 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 LINC00523Q86TU6 105 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 ART4Q93070 314 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 FAM111AQ96PZ2 611 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 FTHL17Q9BXU8 183 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 CNGB3Q9NQW8 809 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 NT5C1B-RDH14C9J2C7 533 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 UBOX5O94941 541 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 S100BP04271 92 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 CKMP06732 381 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC45A4Q5BKX6 768 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZDHHC24Q6UX98 284 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC24A5Q71RS6 500 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 UNC45BQ8IWX7 931 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 GIPC2Q8TF65 315 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 PPWD1Q96BP3 646 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 ASIC4Q96FT7 647 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 PGM2Q96G03 612 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 UROC1Q96N76 676 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 TRIM56Q9BRZ2 755 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZNF670Q9BS34 389 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 NUF2Q9BZD4 464 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 PCDH18Q9HCL0 1135 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 AAASQ9NRG9 546 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 CACNG4Q9UBN1 327 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 IGKV6-21A0A0C4DH24 114 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 PIAS1O75925 651 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 CYBBP04839 570 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 NNMTP40261 264 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 GPD2P43304 727 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 TWF1Q12792 350 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 TSTA3Q13630 321 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SDHAF4Q5VUM1 108 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC26A11Q86WA9 606 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 CCNJLQ8IV13 435 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 NETO2Q8NC67 525 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 FAXDC2Q96IV6 333 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 GPR88Q9GZN0 384 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 PRDM12Q9H4Q4 367 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 LRRC40Q9H9A6 602 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 DLGAP2Q9P1A6 1054 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 GTF2IRD1Q9UHL9 959 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 TRIM33Q9UPN9 1127 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 AAR2Q9Y312 384 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 SH3BP1Q9Y3L3 701 aa11.89□□□□□ -0.51
TRAPPC9-202ENST00000438773 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 DNAJC8O75937 253 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 HAUS5O94927 633 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZWINTO95229 277 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 CDKN2BP42772 138 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 GEMP55040 296 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 PURAQ00577 322 aaKnown RBP11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 SOWAHAQ2M3V2 549 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZDHHC14Q8IZN3 488 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 PPP1R2P1Q96PQ5 205 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms