RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 LRRC3BQ96PB8 259 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 ARHGEF3Q9NR81 526 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 RCOR3Q9P2K3 495 aaPredicted RBP11.9□□□□□ -0.5
SNHG3-202ENST00000437681 DRGXA6NNA5 263 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 NDUFA10O95299 355 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 PAPSS2O95340 614 aaPredicted RBP11.9□□□□□ -0.5
SNHG3-202ENST00000437681 ADH5P11766 374 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 HOXC13P31276 330 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 ZXDBP98169 803 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 DHCR24Q15392 516 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 LRRC38Q5VT99 294 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 ETFBKMTQ8IXQ9 262 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 ZNF687Q8N1G0 1237 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 EDEM1Q92611 657 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 CLDN23Q96B33 292 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 DDIT4Q9NX09 232 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 TAS2R14Q9NYV8 317 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 TJP2Q9UDY2 1190 aa11.9□□□□□ -0.5
SNHG3-202ENST00000437681 WASH4PA8MWX3 477 aa11.9□□□□□ -0.51
SNHG3-202ENST00000437681 M0QYT0 321 aa11.9□□□□□ -0.51
SNHG3-202ENST00000437681 CYP17A1P05093 508 aa11.9□□□□□ -0.51
SNHG3-202ENST00000437681 EIF4HQ15056 248 aaKnown RBP11.9□□□□□ -0.51
SNHG3-202ENST00000437681 FAM71BQ8TC56 605 aa11.9□□□□□ -0.51
SNHG3-202ENST00000437681 WDCPQ9H6R7 721 aa11.9□□□□□ -0.51
SNHG3-202ENST00000437681 STARD13Q9Y3M8 1113 aa11.9□□□□□ -0.51
SNHG3-202ENST00000437681 MDM4O15151 490 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 RNF8O76064 485 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 RFC1P35251 1148 aaPredicted RBP11.89□□□□□ -0.51
SNHG3-202ENST00000437681 FLT3P36888 993 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 PLK1P53350 603 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 BOLA3Q53S33 107 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 TMEM196Q5HYL7 178 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 MS4A13Q5J8X5 152 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 POLNQ7Z5Q5 900 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 CD101Q93033 1021 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 CHP1Q99653 195 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 CD320Q9NPF0 282 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 TMEM221A6NGB7 291 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 PRR33A8MZF0 331 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 CHURC1-FNTBB4DL54 471 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 SPECC1L-ADORA2AF8WAN1 911 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 M0R296 226 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 ZNF189O75820 626 aaPredicted RBP11.89□□□□□ -0.51
SNHG3-202ENST00000437681 TBX18O95935 607 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 PLEKP08567 350 aaPredicted RBP11.89□□□□□ -0.51
SNHG3-202ENST00000437681 L1CAMP32004 1257 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 TERF2Q15554 542 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 TMCO4Q5TGY1 634 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 C11orf63Q6NUN7 778 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 TRMT11Q7Z4G4 463 aaKnown RBP11.89□□□□□ -0.51
SNHG3-202ENST00000437681 BBS7Q8IWZ6 715 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 RNF10Q8N5U6 811 aaKnown RBP11.89□□□□□ -0.51
SNHG3-202ENST00000437681 NDRG1Q92597 394 aaKnown RBP11.89□□□□□ -0.51
SNHG3-202ENST00000437681 PIWIL1Q96J94 861 aaKnown RBP11.89□□□□□ -0.51
SNHG3-202ENST00000437681 COL25A1Q9BXS0 654 aaPredicted RBP11.89□□□□□ -0.51
SNHG3-202ENST00000437681 SFMBT1Q9UHJ3 866 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 MUTYHQ9UIF7 546 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 PCDHA13Q9Y5I0 950 aa11.89□□□□□ -0.51
SNHG3-202ENST00000437681 MIA3Q5JRA6 1907 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 KANSL1LA0AUZ9 987 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 GOLGA8SH3BPF8 625 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 KLKB1P03952 638 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 CTHP32929 405 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 MAGEA1P43355 309 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 VAV2P52735 878 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 GFPT1Q06210 699 aaPredicted RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 GAB4Q2WGN9 574 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 FAM133BQ5BKY9 247 aaKnown RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 PIK3R6Q5UE93 754 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 MANEALQ5VSG8 457 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 FYB2Q5VWT5 728 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 RHBDF2Q6PJF5 856 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 MIB1Q86YT6 1006 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 ZNF683Q8IZ20 524 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 RIN3Q8TB24 985 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 RSAD2Q8WXG1 361 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 SPTLC3Q9NUV7 552 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 KMT2EQ8IZD2 1858 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 BRWD1Q9NSI6 2320 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 F5H5T6 163 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 FGF10O15520 208 aaPredicted RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 CCP110O43303 1012 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 CTIFO43310 598 aaKnown RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 CLDN11O75508 207 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 PROSCO94903 275 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 ASLP04424 464 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 ASGR2P07307 311 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 TACR2P21452 398 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 GJA4P35212 333 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 ADRA1BP35368 520 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 ETFBP38117 255 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 GRIA2P42262 883 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 MAPKAPK2P49137 400 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 CDH4P55283 916 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 MRPS21P82921 87 aaKnown RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 TAF5Q15542 800 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 HADHQ16836 314 aaKnown RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 TRNP1Q6NT89 227 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms