RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ESRRAP11474 423 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CST5P28325 142 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 GNA13Q14344 377 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 NET1Q7Z628 596 aaPredicted RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 GRAMD1CQ8IYS0 662 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 CNDP1Q96KN2 507 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 HERC2P3Q9BVR0 1158 aa3.87□□□□□ -1.79
SHPRH-205ENST00000433355 POLR2AP24928 1970 aaKnown RBP3.87□□□□□ -1.79
SHPRH-205ENST00000433355 RGSL1A5PLK6 1076 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SOAT2O75908 522 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 FARP2O94887 1054 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 FTCDO95954 541 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ANXA6P08133 673 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CD44P16070 742 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ERCC2P18074 760 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 KRT20P35900 424 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TUBA3CQ13748 450 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ARHGAP44Q17R89 818 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SLC9A4Q6AI14 798 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 LVRNQ6Q4G3 990 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 LRRC43Q8N309 656 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 LRRC1Q9BTT6 524 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SUGCTQ9HAC7 445 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 EFCAB1Q9HAE3 211 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 AGPAT5Q9NUQ2 364 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DMGDHQ9UI17 866 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PCDHA11Q9Y5I1 949 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TRIM49P0CI25 452 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TRIM49CP0CI26 452 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 KCNA2P16389 499 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ITGB5P18084 799 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 HSD17B2P37059 387 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PLA2G4AP47712 749 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 LAMTOR4Q0VGL1 99 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PTK7Q13308 1070 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 USP49Q70CQ1 688 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 NUDCD3Q8IVD9 361 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 METTL13Q8N6R0 699 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CNTD1Q8N815 330 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PRELID2Q8N945 189 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PGAP3Q96FM1 320 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TUBGCP5Q96RT8 1024 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PAFAH2Q99487 392 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SPATA9Q9BWV2 254 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ST7Q9NRC1 585 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CHMP2BQ9UQN3 213 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF711Q9Y462 761 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 NUP214P35658 2090 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SAGE2PA6NJ88 616 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ANGPT2O15123 496 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ESRRBO95718 433 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TTPAP49638 278 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TUBP50607 506 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 POLR2LP62875 67 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 THOC5Q13769 683 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 MYBPC3Q14896 1274 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SPOCD1Q6ZMY3 1216 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TIFABQ6ZNK6 161 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ANKMY2Q8IV38 441 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RPUSD2Q8IZ73 545 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SPPL2BQ8TCT7 592 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 HTR3CQ8WXA8 447 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 LRIG1Q96JA1 1093 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RNPEPL1Q9HAU8 725 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 MAGED2Q9UNF1 606 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 hCG_1818297A0A087WSY0 165 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 INPPL1O15357 1258 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CCR1P32246 355 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 AP1S1P61966 158 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 BASP1P80723 227 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 MED21Q13503 144 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SLC25A52Q3SY17 297 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CELF3Q5SZQ8 465 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ADGRD1Q6QNK2 874 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF354CQ86Y25 554 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RFX6Q8HWS3 928 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RASSF5Q8WWW0 418 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PLD4Q96BZ4 506 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SAYSD1Q9NPB0 183 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PRDM10Q9NQV6 1147 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 IRGMA1A4Y4 181 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DHX15O43143 795 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RASSF9O75901 435 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TNFAIP8O95379 198 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 MLYCDO95822 493 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 EDN1P05305 212 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 IL10P22301 178 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 WARSP23381 471 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PDIA2Q13087 525 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SP140Q13342 867 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ELOAQ14241 798 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM44Q2T9K0 475 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 NIPAL1Q6NVV3 410 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 BHLHB9Q6PI77 547 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 C15orf39Q6ZRI6 1047 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SAMD14Q8IZD0 417 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SH2D3CQ8N5H7 860 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 OR9Q1Q8NGQ5 310 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RASGRP4Q8TDF6 673 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms