RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 GRIA4P48058 902 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 VAMP7P51809 220 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 SCAPQ12770 1279 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 GRIK2Q13002 908 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 COL9A2Q14055 689 aaPredicted RBP8.68□□□□□ -1.02
CDH13-203ENST00000431540 FUT11Q495W5 492 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 C10orf120Q5SQS8 335 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 ARHGAP17Q68EM7 881 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 KIAA1211LQ6NV74 962 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 TPGS1Q6ZTW0 290 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 USP30Q70CQ3 517 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 ARMCX6Q7L4S7 300 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 TMPRSS12Q86WS5 348 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDH13-203ENST00000431540 ANKRD52Q8NB46 1076 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 OR2T3Q8NH03 318 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 IGSF8Q969P0 613 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 ACOX2Q99424 681 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 SDCBP2Q9H190 292 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 GAREM1Q9H706 876 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 SGK2Q9HBY8 427 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 SLC39A2Q9NP94 309 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 TM7SF3Q9NS93 570 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 NAGPAQ9UK23 515 aa8.68□□□□□ -1.02
CDH13-203ENST00000431540 HBS1LQ9Y450 684 aaKnown RBP8.68□□□□□ -1.02
CDH13-203ENST00000431540 A0A087WV48 116 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 A0A1W2PQH9 124 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 ANTXRLA6NF34 631 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 CAPN8A6NHC0 703 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 MEI4A8MW99 385 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 KLRC4O43908 158 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 TBX18O95935 607 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 KLKB1P03952 638 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 NR3C1P04150 777 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 ATP5BP06576 529 aaKnown RBP8.67□□□□□ -1.02
CDH13-203ENST00000431540 KRT13P13646 458 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 CMA1P23946 247 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 PSMC2P35998 433 aaKnown RBP8.67□□□□□ -1.02
CDH13-203ENST00000431540 NUDT1P36639 197 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 GRK6P43250 576 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 HARS2P49590 506 aaKnown RBP8.67□□□□□ -1.02
CDH13-203ENST00000431540 COPAP53621 1224 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 FAM193AP78312 1265 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 STK4Q13043 487 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 ZNF234Q14588 700 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 TRIP4Q15650 581 aaPredicted RBP8.67□□□□□ -1.02
CDH13-203ENST00000431540 SMAD1Q15797 465 aaKnown RBP8.67□□□□□ -1.02
CDH13-203ENST00000431540 HLA-BQ31612 363 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 ADGRF1Q5T601 910 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 DCAF12L1Q5VU92 463 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 KRT39Q6A163 491 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 FAM173BQ6P4H8 233 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 SCD5Q86SK9 330 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 NELFCDQ8IXH7 590 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 C12orf29Q8N999 325 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 PLEKHO2Q8TD55 490 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 RHBDD1Q8TEB9 315 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 HPS3Q969F9 1004 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 SNX21Q969T3 373 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 CCDC34Q96HJ3 373 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 FAM84AQ96KN4 292 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 GPR174Q9BXC1 333 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 MKRN2Q9H000 416 aaKnown RBP8.67□□□□□ -1.02
CDH13-203ENST00000431540 TMEM245Q9H330 911 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 NMUR1Q9HB89 426 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 TMEM8AQ9HCN3 771 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 EXOC1Q9NV70 894 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 OSER1Q9NX31 292 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 MARCH2Q9P0N8 246 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 AGO1Q9UL18 857 aaKnown RBP8.67□□□□□ -1.02
CDH13-203ENST00000431540 PCDHA7Q9UN72 937 aa8.67□□□□□ -1.02
CDH13-203ENST00000431540 FAM237AA0A1B0GTK4 181 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
CDH13-203ENST00000431540 TRIM24O15164 1050 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 TSPAN3O60637 253 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 RHOBTB3O94955 611 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 HLA-DRAP01903 254 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 IRF1P10914 325 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 CCDC130P13994 396 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 CD27P26842 260 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 IL12RB1P42701 662 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 YWHAEP62258 255 aaKnown RBP8.66□□□□□ -1.02
CDH13-203ENST00000431540 ARID5AQ03989 594 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 ILKQ13418 452 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 CUL4BQ13620 913 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 PTPRNQ16849 979 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 EDRF1Q3B7T1 1238 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 KIAA1324Q6UXG2 1013 aaKnown RBP8.66□□□□□ -1.02
CDH13-203ENST00000431540 SLCO6A1Q86UG4 719 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 UNC45BQ8IWX7 931 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 AHI1Q8N157 1196 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 GUF1Q8N442 669 aaKnown RBP8.66□□□□□ -1.02
CDH13-203ENST00000431540 DDI1Q8WTU0 396 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 KCTD13Q8WZ19 329 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 WBP2Q969T9 261 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 TMA16Q96EY4 203 aaKnown RBP8.66□□□□□ -1.02
CDH13-203ENST00000431540 TMEM176AQ96HP8 235 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 DDX50Q9BQ39 737 aaKnown RBP8.66□□□□□ -1.02
CDH13-203ENST00000431540 NIF3L1Q9GZT8 377 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 BTBD1Q9H0C5 482 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms